Labeo rohita (rohu): 127172596
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Entry
127172596 CDS
T09007
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127172596 (pum3)
03009 Ribosome biogenesis [BR:
lroh03009
]
127172596 (pum3)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127172596 (pum3)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127172596 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
LTN1_E3_ligase_6th
AbiEi_3
Motif
Other DBs
NCBI-GeneID:
127172596
NCBI-ProteinID:
XP_050977897
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All DBs
Position
10:20639654..20652254
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AA seq
631 aa
AA seq
DB search
MHSSMEAKPRKKSFTPRDGKKPAFKPKGKPGGKPQGKRPFKPHNTDKGKTFKKSGGDGGP
RKFNRKPADGKFTKKRKHPGSKEDGGPEGKKPKWDEFKQKKKELKQNRQQNDRKESYQIV
SRAKQVWEIVRRKDCDKQKRAKLMKELQSLVKGKIKTIAFAHDSTRVLQCFIQFGSDKQR
QEVFDELKEHIVDLSKSKYARNIVKKFLMYGSKQQVGEVMLAFKGKVRQMLRHSEASSVV
EYAYNDKAILSQRLMLTEELYGNTFQVFKSSICPTLEKVLEANPEKLESILDEMKQILTP
MAQKEAVIKHSLVHKVFLDFFEHAPAKLRTEMIESIREAVVYMAHTHDGARVTMHCLWHG
TPKDRKVIVKTMKSYIAKFAMGEYAHLVLLAAFDCIDDTKLVKQIIISEMVSSLSEIISN
KHGKKVLLYLLSPRDPAHLLPEIIQVLEKGDGNAHSKKDVAIRRKELLEAVSPPLLKYLC
ENAQSMVMDKACSVAVSDILGAAIGDLRPAMEAVADLAAGPLVPGGEDGQLHMAEHPAGH
LVLKWLVEQDTKMKEAEREERFSSILLEKVGLENLKTWASVNRGAIVLCCLLQSADESVA
EEVKVMLKSILPKLQKIQNSKGVEVLLEKLA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagtatggaggccaaaccaagaaagaagtcatttacacctagagacgggaag
aaaccagcattcaagccgaaaggtaaaccaggaggaaaaccacaaggcaaacgaccattt
aaacctcacaacacagacaaaggaaagactttcaaaaaatcaggtggagatggaggaccg
cggaaattcaaccgaaaaccagcagatggaaagttcacaaagaagagaaaacaccctgga
agcaaagaagatgggggcccagaaggcaagaaaccgaaatgggatgaattcaagcaaaaa
aagaaagagttaaagcagaatcgccagcagaatgatagaaaagagagttaccagattgta
agcagagcaaagcaagtgtgggaaattgtaaggcggaaagactgtgacaagcaaaaaagg
gccaaactgatgaaagaactgcagagtcttgtgaagggcaaaattaaaacaattgcattt
gctcatgattccacacgagtgcttcagtgttttattcagtttggcagtgataaacagaga
caggaggtctttgatgagctcaaagagcacattgtggacttgagcaaatcgaaatatgcc
agaaacattgtgaaaaagtttctaatgtatgggagtaaacagcaggtgggggaagtgatg
ttggcttttaaggggaaggtcagacagatgctcagacactctgaggcgtcttcagtggtc
gagtacgcttacaacgataaggccatcctgtcccagaggctcatgctcacggaggagctc
tacggcaacacattccaagtcttcaagtcctcaatttgtcctaccttagagaaggttttg
gaagcaaatccagagaaattagaaagtatcttggatgaaatgaagcagattctcacaccg
atggcacagaaggaagccgtcattaaacattcattggtccacaaagtttttctggacttc
tttgagcacgctccagccaaactgagaacggagatgatagagtccatcagagaggcggtc
gtgtacatggcacacacacatgatggagccagagtcaccatgcactgcttatggcacggc
acacccaaggaccgaaaagttatagtaaaaacaatgaaatcatacattgcaaaatttgca
atgggtgaatatgctcatcttgtactattggctgcattcgactgcatcgatgacaccaag
ttggttaaacaaattatcatctcagaaatggttagttccttatctgaaataatcagcaat
aaacatggtaaaaaagtgctgctttacctcctgagtccaagagaccctgcccacctctta
cctgagatcattcaggtgcttgagaagggtgacggcaatgcacacagtaagaaggatgtt
gcaatcaggaggaaagagctgctggaggccgtgtctcctcctctgctgaagtacctgtgt
gagaacgctcagtctatggtcatggataaagcatgtagcgtggctgtgagtgacatcctg
ggcgccgccatcggagatctcagacctgccatggaggctgtggcggatctggcagccgga
cccctcgtaccgggaggagaagatggccagcttcatatggcagaacaccccgctggtcat
ctggtgttgaaatggttggttgagcaggacaccaaaatgaaggaggcagagagagaagag
cgattttccagcattcttctggagaaggtggggttggagaacctcaagacatgggcttca
gtcaaccgtggtgccattgttctttgttgccttcttcagagtgcagatgaaagtgttgct
gaagaagtgaaagttatgttgaaatccatccttcctaaactacagaagatccagaactct
aaaggagttgaggttctgctcgaaaaactggcctga
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