Labeo rohita (rohu): 127172652
Help
Entry
127172652 CDS
T09007
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127172652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127172652
04147 Exosome [BR:
lroh04147
]
127172652
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
127172652
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127172652
Exosomal proteins of other body fluids (saliva and urine)
127172652
Exosomal proteins of colorectal cancer cells
127172652
Exosomal proteins of melanoma cells
127172652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
Tup_N
DUF1664
TolA_bind_tri
CCDC92
Fib_alpha
DDE_Tnp_IS240
PUMA_CC
TPR_MLP1_2
Sugarporin_N
HH_AprE
COLEC12
Motif
Other DBs
NCBI-GeneID:
127172652
NCBI-ProteinID:
XP_050977940
LinkDB
All DBs
Position
11:complement(7003270..7006097)
Genome browser
AA seq
495 aa
AA seq
DB search
MSVSVRQMSSKGPKTVTSKSTVTKSRCGSTVSPQKAYSVYGGGLGGNTRISCGFRSGGYG
GGLGGGYGGGYGGGYGGGSGFGGGYGGGLGGGYGGGFGAGILPGGCIGGDFQLNEKATMQ
NLNDRLASYLDKVRSLEAANAILEKQIREYYEKKGPIAQRDYSPYWNTIKDLKDKIKNAT
IQNANILLQIDNSKLAADDFRVKYEHEVVMRQCVESDVANLRRLLDQTTMAKNDLQMQIK
SLEEELAFMKKNHQEELAALRTQLTGTVNVEVDAAPQEDLNKVLEEIRAHYETIIQKHRR
DQEAWFKEKMAGLNKEVAQNTEVIETSRSQVTELRNTLQSLEIELQSQFSMIAALEKTLA
ETEARYSSMLAGYQNQINMLEAELAQLRASIEQQGRDYALLLDIKARLEQEIATYRSLLE
NQDIKTQIPGGSITISGGSQSSGGIHFATSGGSQSSGGSHTVTSGGSQSSGGSHTISTGG
PAIQIKQNTTTIRKY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtctctgttcgccagatgtcttccaaaggacccaagaccgtgacctcaaagtcc
actgtcaccaagagtcgctgtggttcgacggtctctccacagaaagcctacagtgtgtac
ggaggtggtttaggaggaaatacccgcatctcttgtggcttcagaagtggaggatatggt
ggaggacttggtggaggatatggtggaggatatggtggaggatatggtggaggaagcggc
tttggtgggggatatggtggaggacttggtggaggttatggtggaggatttggagcaggc
atattgcctggaggctgcattggaggggactttcagctaaatgagaaggccaccatgcag
aacctgaacgaccgcctggcatcctacctggacaaggtgcgctcactggaggctgccaat
gccatcctggaaaagcagatccgcgagtactatgagaagaaagggccaatcgcacagagg
gactacagcccctactggaacaccatcaaggacctgaaggacaagattaaaaatgctacc
atccaaaacgccaacatcctcctgcagattgacaactctaaactggctgctgatgacttc
agggtgaaatatgagcatgaggtggtgatgcggcagtgtgtggagtctgacgtcgctaac
ctgcgccgcttgctggaccagacaaccatggcaaagaacgacctgcagatgcagatcaag
agtctggaggaagagctggcatttatgaagaagaaccaccaggaggagctggctgcactg
aggactcagttgacaggtactgtgaacgtagaggttgatgctgctcctcaggaagacttg
aacaaggttctagaggagattcgtgctcattatgagaccatcatacagaaacaccgcagg
gatcaggaagcctggtttaaagaaaagatggcagggttgaacaaagaagtggcccagaac
acagaggtcatagaaacatccaggtcacaggtcacagagctgcgaaacaccttacagagt
ctggagatcgagctacagtctcaattcagcatgatagcagcactggagaagacactggca
gaaacagaggctaggtacagctctatgttagcaggctaccagaaccaaatcaacatgctg
gaagctgagttggctcagttgagagctagcattgagcaacagggacgagattacgccttg
ttgctggacatcaaggctcgtctggagcaggagattgctacctacagaagccttcttgaa
aatcaagacattaagactcaaattccaggtggatctatcactatctcaggtggatctcaa
tcctctggtggtatccactttgccacatctggtggatctcagtcctctggtggatcccac
actgtcacatctggtggatctcaatcctctggtggttcccacaccatctcaactggtgga
ccagcaatccaaataaagcaaaacaccaccacaatccgtaaatactaa
DBGET
integrated database retrieval system
