Labeo rohita (rohu): 127172721
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Entry
127172721 CDS
T09007
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127172721 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127172721 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
127172721 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127172721 (cacna2d3)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127172721 (cacna2d3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
127172721
NCBI-ProteinID:
XP_050978034
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All DBs
Position
11:17789878..17843624
Genome browser
AA seq
1086 aa
AA seq
DB search
MQWNRRIPLMHARCLLLCVMSAFWTALEVRGSQPEIPLSVVKLWASAFGGEIKSIASKYS
GSQLLQKKYKEYEKSVRIEEIDGAKLVKNLALNMEEIFRKKAEATRRLVEAAEEAHLQHE
ENPDLQYEYFNAVLINEVDEDGNSVELGGEFLLEPNDHFNNLSVNLSLSVVQVPTNMYNK
DPDIVNGVYWSEALNKVFVDNFKRDPTLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFDC
RNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVASILDTLGDDDFFNIIAYNQEI
HYVEPCLNGTLVQADSTNKDHFKEHLDKLFAKGIGLLGNALTEAFTILNEINQTGRGSSC
SQAIMLITDGATEMHDDVFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFSQI
STLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALAQAHKLGENKGPNPMTTVAM
PVFSTKNETKNQGILLGVVGTDIPIQELMKTIPKHKLGIHGYAFAITNNGYILTHPDLRP
LYQEGQKRKKPSYSSVDLSEVEWEDTEDVLRTAMVNRRTGTFSMEVKRTVDKGKRVLTMH
NDYYYTDIRGTPFSVGVALSRGHGKYFFKGNVSLEAGLHDLEQPDVALADEWTYCNTDEH
HEHRHLTQVQAIKLYMTSRKPHLKCDRELIQQVLFDAVVTAPLEAYWTGLALNKSENSDK
GVEIAFLGTRTGLSRTNLFVVPEQLTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTF
VYSIPFSSGGENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQRKFWTASRQCNALD
GKCTISCDNEDIKCYLIDNNGFILVSEDTLQTNLFFGQVEGAVMNKLLLMGSFKKINLYD
YQALCKEYAGSSDSARTLLDPFTTVKWLLTELVIFLLEFNLYSWWNYDSTVKAQRAQRTM
MVPCDTEYPAFVSERTIKETTGNIDCGGCIRTFVIQQIPSSNLFMVVVENKCDCSSAPPV
TMEPIEIIYNESLKCDRLKFQKDRRRPQSCHPFHPEENAIECGSANALNFPLVAILFSVL
SFLISR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggaaccggagaattcctctgatgcatgcgcgctgcctcctcctgtgtgtgatg
agcgcattctggacagcgctggaggtgcgggggtcccaaccggagatccccttatcagtg
gtgaaactctgggcttcagcgtttggtggtgaaataaaatcaatagcttcaaaatactca
ggatctcagctcttacagaagaaatacaaggaatatgagaagtcggtgcgaatagaggag
atcgacggcgcaaaattggtgaaaaatctggcgctgaatatggaggaaatatttcggaaa
aaggcggaggctacacgtaggctcgtagaagcggcagaagaagctcatcttcagcatgag
gagaaccctgacctacagtatgagtatttcaacgcagtgctgataaacgaggtggatgaa
gacgggaacagcgtggagctgggtggagagtttcttctggaacccaacgatcattttaat
aacctatccgtcaacctcagcctcagcgtggtgcaggtgccaactaacatgtacaataaa
gaccctgacatagttaatggagtctattggtcggaagccttgaacaaagttttcgtggat
aacttcaaaagggacccgacccttatttggcagtacttcggaagcgctaaaggttttttc
cgacaatacccaggtgtgaaatggcatcctgatgaacatggtgtcattgcttttgactgc
aggaacagaaaatggtatatccaggcggcaacttctcctaaagatgttgtgattcttgtg
gatgtcagtggcagtatgaaaggtttaagactgactatagccagacagacggtcgcttcc
atactggatacgctcggggatgatgacttcttcaacattattgcatacaaccaagagatt
cattatgtggagccctgtctaaacggcactctcgttcaagctgacagtactaataaggat
cactttaaagagcatctggacaagttattcgccaaaggaatcggactcctgggcaatgca
ctgactgaggctttcactatcttaaatgagattaatcagaccggccgtggaagttcatgt
agtcaggcaatcatgctgataacagatggagccactgaaatgcacgatgatgttttcgcc
aaatataactggcctgagcgcaaggttcgtatattcccatatctgattggccgagaatct
gcgttcgctgataacctaaaatggatggcgtgtgctaataaaggttattttagtcagatt
tccacactggctgacgttcaggagaacgtgatgcggtatttgcacgtgatgagcagacct
aaggttatcgaccacgaacatgacacagtgtggactgaagcctacgtggacagcgcactc
gcacaggcgcacaagcttggagagaataaaggtccaaacccgatgaccacagtcgccatg
cctgtgtttagcaccaagaatgaaacgaaaaaccaaggcatcctgctaggcgtcgtaggc
actgacatacccattcaggagttaatgaaaaccatcccaaaacacaagctaggaatacac
ggatacgcgtttgccattaccaataacggatatatcctgacacatcccgacctgaggccc
ctgtaccaggagggccagaagaggaagaaacccagttacagcagcgtggacctgtccgag
gtggaatgggaggacacagaggatgttttgcgaacagcaatggtgaacagacgaactggc
actttctcaatggaagtaaaaagaactgtggataaagggaaacgtgtcttgacgatgcac
aatgattattactacactgatattagaggaactccatttagtgtaggtgtggcgctctct
cgaggacatgggaagtacttcttcaagggaaatgtttcactagaagctggtctacatgat
ctggagcaaccagatgttgcccttgctgatgaatggacatactgtaacacagatgagcat
catgagcatcgtcacctgactcaagttcaggccattaaactctacatgaccagtcgtaaa
ccgcatctcaaatgtgacagagagctgattcagcaggttttgtttgacgctgtagtaacg
gctcctttagaagcgtactggactggactggccctcaataagtctgagaattctgataaa
ggggttgagatcgctttcctcggcactcgcaccggcctttccagaaccaacctgtttgtg
gttcctgagcagctgaccaatcaagatttcctcactgctgaagacaaggaaggtgtcttt
aatgcagatcactttcctctgtggtataaaagagccgcagagcaggtgcccggcaccttc
gtgtactccattccctttagttcaggaggcgaaaataagagtgtggttttggcgagcacc
gctatacaactactcgatgacaggaagtctcctatagtggcagctgtgggaattcaaatg
aagctggaattctttcaaagaaaattttggacggccagtcggcagtgcaatgctctggat
gggaaatgcaccatcagctgtgataatgaggacattaaatgttatctcatagacaacaat
ggcttcatcctggtgtctgaagacactttgcagacgaacctcttctttggacaagtggag
ggagccgtcatgaacaaactgcttctgatgggctcatttaaaaagattaatttgtatgac
tatcaggctctctgtaaagagtacgcaggcagcagtgacagcgcacgcactctgctggat
cccttcaccactgtgaaatggctcttgacagaacttgtcatatttctgctggaatttaac
ctgtacagctggtggaactatgactcgacagtcaaagcccagagagctcagaggacaatg
atggtgccatgtgacactgaatacccagctttcgtctctgagcgcaccatcaaagaaaca
acagggaacattgactgtggaggctgtatacggacctttgtaattcagcagattcccagc
agtaacctgttcatggtggttgttgagaataaatgtgactgtagctccgcccctccagtt
accatggagcccattgagatcatttataatgagtctctgaagtgtgacagactgaagttt
caaaaggatcgcagacggccacagtcctgtcatccatttcatccagaggagaacgctatt
gaatgcggctcagcaaatgctttgaattttccactggtagccatattattctcagtgttg
tcgttcctgatcagcaggtga
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integrated database retrieval system
