Labeo rohita (rohu): 127172772
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Entry
127172772 CDS
T09007
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04148
Efferocytosis
lroh04218
Cellular senescence
lroh04310
Wnt signaling pathway
lroh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127172772 (nfatc4)
04020 Calcium signaling pathway
127172772 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127172772 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
127172772 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127172772 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172772 (nfatc4)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
127172772 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
127172772
NCBI-ProteinID:
XP_050978121
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Position
2:complement(26940792..26957023)
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AA seq
873 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPRQSRCGPEETESGQTHHEPAGMSDTHLTSAQAGQP
MGIPSSSGRRAGMHSPPPRRALVREFSGTYESLPARSIQVSESRVLECPSIQITTISPED
DSGPAGGRYWDGGGGWDRERLYLPLLDSYRDVMTGAGSLSPTPSPASSSSSRGWLSPASS
CDSLLVEEDELNEAAAHFCLSPSSRPTSPGGKKRRNSPLASPSTSRRSSYSEDLSSLPDT
GETSAQSQAPASCELNIPQKTRKTSLEQMSSRDIEPELTPVQTSPCPLPEVAQLRREPPT
LGMDYLSVPPALGWGRTRASAHSPLFRSNALPPLDWPLPSQFDQYELRIEVQPRPHHRAH
YETEGSRGAVKASPGGHPVVKLVGYTERQPLSLQVFVGTADDRSIRPHPFYQIHRVTGKM
VGTASQESIQAGTKLLDIPLNPENNMTALIDCAGILKLRNSDIELRKGETDVGRKNTRVR
LVFRTHLPLSPPVVPPGRVLALQVASLPIECSQRSAQELPVVESISLTSCSTEGGEELLL
GGTNFLPTSRVFFMERGSDGKVQWEEEAHVDRDKSNENLLCVRVPAYNDLSLNHPVSVCL
YVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSILPLDGVTLCPMGSGSSVDMRSDLSAD
DRSMSFHLPPYPNEYSYPSHGYQEDYCRKPEVSEDGGGRSALTERHPSFESLELGFTELL
PPMYPRASQPLSPSPSPSPWLDSPYLSSSPSPSHSCSLSPFPASSPISTSPLPPLSHSPY
PHCPCPQEMCSSPPSNTSQYQDLCPPPYGQYESWEHQMRPAERDTGPGLKLEGPPDFTGP
SPMQHITLEEVTEFIGEDIRSFQMGSHMDSRPG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggatgggaggagggagagttcgagttcaagctcgtgttc
gaggaggatccgccgcgccagagccgctgcggcccagaggagaccgagagcggccagacg
caccatgagcctgccggtatgagcgatactcacttgacttccgcacaggctggccaaccc
atgggtatcccatcatcatccggtcgcagggctgggatgcattccccgcccccaagacgg
gcattagtcagggagttcagtgggacttatgagagtctaccagcgagatcaatacaggta
tcagagtcaagagtgcttgagtgtcccagcatccagatcaccactatctcccctgaagat
gactcagggccagcggggggacgttactgggacggcggaggtggctgggacagggagcgt
ctatacctgcccctgctggactcttaccgtgacgtcatgacaggggcaggttccctcagt
cccacccccagccctgcttccagttcctcatctcgtggatggctgagtccagcttccagc
tgtgattctctcctggtggaggaggacgagctcaacgaagctgctgcccacttctgccta
tcgccttcctcacgccccacgtctcctggaggcaaaaagcgcaggaactcgccactggcc
tcccccagcacctcccgcagaagcagctactccgaggatctctcctccctcccggacaca
ggagaaacctctgctcagtctcaggctccagcgagctgtgagctcaacatcccacagaag
accaggaagacctctctggaacagatgtcatcaagagatatcgagccagagctgacccct
gttcagacctctccctgcccccttccagaggtggctcagctgagaagggagccccccaca
ctagggatggactacctgtctgtgcctcctgctctgggctggggcaggaccagggccagc
gctcacagtcctctctttagatctaatgcactgcccccacttgactggccgctgccttca
cagtttgaccaatatgaactgcgcatagaggtacagcccagaccacaccatcgtgctcat
tatgaaaccgaaggaagtcgaggagcagtaaaggcatcacctggaggccatccagtagtg
aagctcgtgggttacactgagagacagccgctctccttacaggtgtttgtaggaactgcc
gatgacagatcaatacgtcctcatcctttttatcaaatacacagagtaacagggaagatg
gtaggcacagctagtcaggagagcatccaggctggcaccaaactcctggacatcccactc
aacccagagaacaacatgactgccctcattgactgtgcaggtattctaaagctgaggaac
tctgacattgagctccggaaaggagagacggatgtaggcagaaagaacactcgagtgcgt
ttggttttccgcacacaccttcctctgtctccacccgttgtccctccgggacgagtctta
gccctgcaggtggcctctttacccattgaatgctcacagcgctctgcacaggaacttcct
gtagtggagtctatcagtcttacttcctgttcaacagagggaggtgaggaactacttcta
ggtgggaccaactttctacccacctccagagttttctttatggagagaggatcagatggc
aaagtccagtgggaggaggaggcacatgtggacagggacaaaagcaatgagaatttgctg
tgtgtacgagtgccagcctataacgatctttcactgaatcacccagtatctgtgtgcctg
tatgtgtccaatgggaagaggaaaaggagcagcacgcactgttttaaatatctgcccatc
atgtttaaagaggaagacccgctgctgtcccgtccctccatcttgcccctggatggggtg
acgctttgccccatggggagcggcagctctgtcgacatgaggtcagacctatccgcagat
gacagaagcatgtctttccacctgccaccatatcccaatgagtactcttacccctcgcat
ggctaccaggaggactactgccgcaaaccagaggtttccgaggacggtggaggtcgaagt
gccctgaccgaaaggcatcccagctttgagagcctggagctgggcttcacagagcttctt
cctcccatgtacccaagagcctcacaacctctttccccctccccgtctccctctccgtgg
cttgactcaccctatctgtcttcctcaccttctccctcacactcttgctctctgagcccg
ttccctgcaagcagtccgatctccacttcgcctcttcctccactctctcactctccatat
ccacactgtccttgcccccaagagatgtgctcctcacctccatcaaacactagccagtat
caggacctgtgcccgcctccgtacggccaatacgagagctgggagcaccagatgcgtcct
gctgaaagagacacaggccctggtctgaagttggagggaccaccggatttcacaggcccc
tctccaatgcagcatatcacattagaggaagtgactgaattcattggagaggatatcaga
tcctttcagatggggtcacacatggacagtcgacctggatga
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