Labeo rohita (rohu): 127172790
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Entry
127172790 CDS
T09007
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a
KO
K09381
paired box protein 3/7
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172790 (pax3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127172790 (pax3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_32
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
127172790
NCBI-ProteinID:
XP_050978146
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Position
2:complement(33126999..33161081)
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AA seq
487 aa
AA seq
DB search
MTALAGGISRMMRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSTTPDVEKKIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRMLRCKFGGNGDEDEDDDEVEKREI
EENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSLQPYQLADSPYPPSSISQVSEQPSTVHRPQPLPPTSVHQTGLGSGPGAQEGSSAYCLS
SGRHGFSGYSDGYVAAPGHANPVNPTISNGLPSQVMGLLNPGGVPHQPQSDFALSPLTGG
LEPSTGMAPSCHSSQRLEALPGLPSMPALPSSQSYCPSSYSSPGYSVDHVASYQYSQYGQ
SKVPFII
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcattagcggggggcatttccaggatgatgcgccccacgccaccccaaaactac
ccgagaggaggctattccttggaggtctcaacgccgttaggtcagggccgagtgaaccag
ctcggtggagtctttataaacggacgccctctgccaaatcacatccgccacaagatagta
gagatggcccatcacgggatacggccgtgcgtcatctcccgacagctgcgggtgtcgcac
ggatgcgtgtccaaaattctatgcaggtaccaggaaaccggatccattcggcccggtgct
attggtggcagcaaacccaagcagagcacaactcccgatgtggaaaagaaaatcgaagaa
tacaagagagagaatccagggatgttcagctgggagattcgggataaacttctgaaagat
ggaatctgcgatcgaaataacgtgccctcagtgagttccatcagccgcatgctgcgctgt
aaatttggtggaaacggagatgaagatgaggatgatgatgaagtggaaaaaagggagatc
gaggaaaacgaaagaagagccaaacacagcatcgacggaattcttggcgacagatcaagc
cactcagacgagggctcagatgtggactcagaaccgggtttgccattaaagaggaaacag
cggcgcagtcggaccacgttcacggccgagcagctggaggagctggagagagctttcgaa
cgcacccattaccctgatatttacaccagagaagagctcgctcagagagctaaactcacc
gaggcacgagtacaggtatggtttagtaatagaagagctcgctggaggaagcaggcagga
gccaatcagctcatggcgtttaatcacctgatacctggtggtttcccgccctctgcgatg
tcgagtcttcagccttatcagctggcggatagtccttaccctccctcatcgatctcacaa
gtgtcggagcagcccagcaccgtgcacaggcctcagcctcttccccccacctcagtgcat
cagactgggcttggcagcggaccgggggcccaggaggggagttcggcctactgcctctcc
tctggacgtcatggcttctctggttactcggacggctatgtggccgcgccaggccatgca
aacccagtgaaccccaccattagcaacggcctcccatcacaggtgatgggactgttgaat
ccaggtggagtgccgcaccagccgcagagtgatttcgccctctctccgttgacgggcggt
ttggagcccagcacaggcatggctcccagctgccactcctctcagagactggaggctctg
ccaggtcttcccagcatgccagctctgcccagctcccagtcctactgcccctccagctac
agttcaccagggtacagcgtggaccacgtggcatcttaccagtacagccagtatggacag
agtaaggtgcctttcattatctga
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