Labeo rohita (rohu): 127172791
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Entry
127172791 CDS
T09007
Symbol
camta1b
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172791 (camta1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Other transcription factors
Others
127172791 (camta1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
Ank_3
IQ
AGRB_N
Motif
Other DBs
NCBI-GeneID:
127172791
NCBI-ProteinID:
XP_050978142
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All DBs
Position
11:complement(15844879..16226848)
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AA seq
1793 aa
AA seq
DB search
MAAENKPEGLKKIRNPDRMYRTAVGYTGHVPPKSVSDDTDNNNEHGHLKIYLPKKLLECL
PKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDG
YCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLN
VPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSTGFSAE
QLVQQILDSHQTKPPPRTHNCLCTGNLGAGSSLHHKCNSAKHRIISPKVDPRTGGAYSST
HSEVQNNDVSEGKTEHSHGGGKNGRAGNEGAGGTGGREKRNGKVHKPALLHQNSMEVSSS
NQVEVPDTTQSSPVSISSGLNSDPDMADSPVVTGMGHVASVMSSLSQSATVFMSEVSGDP
VYSMSPTVDPNAHLLGPDTASSSLVLAVTADSHKFAFAGAVGVGLADGGSTDGLAMLSSA
GVSEELVLSSNLESGSIKLPETNMNFDPDCFLNNPKQGQTYGGNGMKTEESNGSSCSNGG
LRCSPPLNDNGYGFNTALVKNIKTEDTSFEQQLAKEGGYQVGEVVSGAVGISGSSNGGSG
QNSLALTPTGSLLPSGGGLSPSTTLEQMDFSAIDAKQDYPTSVMSAAGYAQSISSSHLAH
QSHSPSFFLQGSPQSQNQTHPNNSSSTQNSHDSNAYSTGTNGHLHHHHHTHPSQHTASNC
NGGSPTERNGQAGSLQLLQYQNRFPTPGQEHEEVGGLEQPIGAEQGDGGVQEKDSDGLMK
PGDHLQPGEGGETEGVGGEEHYLQNPTEGGGVGPGSGGTSARAESGTMCNDTEGNGTTNS
PHQQLQPLLQGAGLVQGLFSTVGTHQSLANSGTNGGGSMEINLDHFDVSFGNQFSDLIND
FISVEGGSGTAVVAGSNALYSHQLMTHSGTEGQVSSGTAAQQGADEVAHGARGYNSADLC
LQPCCSPQSTQAGAVAGEAGQLAYMQVAEAVSAAVAHGNMGMLQATGRLFVVTDYSPEWS
YPEGGVKVLITGPWQEASSEYTCLFDQITVPASLIQPGVLRCYCPAHDTGLVTLQVAASS
QIISNSVVFEYKARALPALPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMAGQQQQQQ
SSGGPSESGGTGTGGGEGGRSNSEQAQFSPGQGQSQGQGPAGNSFESRVVVVCEKMMNRA
CWAKSKHLIHSKTFRGMTLLHLAAAQGYTTLIQTLIKWRTKHADSIDLELEVDPLNVDHF
SCTPLMWACALGHMEAAVVLYKWDRRALAIPDSLGRLPLAIARSRGHTKLAECLESLQRE
EQQSGALTSTPSMTFSPSTEASAAEGWMNVWGTETSSVGLKESNLTSSASSSSSDLRRPR
SEPSSFYSSVSHGDAPLSKKHKPNPETLQTRPSKPCSAPVGLEEQAHKPKTCPSKPREGT
GEKEQGDGEQSQTKLGSNCGGGCWGSRQAAGRRVPTAGLGKERLANRLRLREIASAGTIS
DLRTTQEDLENTGDLQNMNMMTLAEEVIEATSDRIKRENFVASDTTLDGVGVSNTMSWLA
SYLGDAERFLFNKPLTSSPGLGPVHGGGQPELDGPLGKLGLQTPAEWTALLNASHNKEER
DLTQLALSDPEQRELYEAARQVQNTFRKYKGRPLREQQELAAAVIQRCYKRYKQLTWIAL
KYALYKKMTLAAILIQSKFRSYHEQKKFQQSRRAAVLIQQYYRSYKELGRPNPRSRATAA
ALVQHKLRSSLLTKRQDQAARKIMRFLLRCRHSPLMDHRLFKRGERIEKGQGT
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaaaacaagccggaaggactgaagaaaatacgtaatccggatcgaatgtac
agaaccgccgtcggttacaccggccacgttcctcctaagagtgtcagcgatgacacagac
aacaacaatgaacatggacatttgaaaatctacctgcccaagaagcttctggaatgcctt
cccaaatgttcctccctccccaaggagagacatcgctggaacaccaacgaggagattgcg
gcctacctgattacgtttgaaaaacatgaggagtggctgacaacgtcccccaaaaccagg
ccgcagaatgggtctatgatcctctacaacaggaagaaggtgaagtacagaaaggatggc
tactgctggaagaagaggaaagatgggaaaaccacgcgggaggatcacatgaagctcaaa
gtgcagggagtcgagtgtctgtacggctgctatgtccactcctccatcattcccaccttc
caccgccgctgctactggctgctgcagaaccctgacattgtgctggtccactacctgaac
gtgcccgccatagaggattgtgggaaaccgtgcgggcccatcctgtgctccatcaacacg
gataagaaagagtgggccaaatggaccaaggaagaactcatcgggcagctcaaacccatg
tttcatggcatcaagtggacttgcagcaacgggaatagcagcactggcttctcagcagag
cagctcgtgcagcaaattctggacagccaccagaccaaaccacctccccggactcacaac
tgcctctgcacgggaaacctgggtgctggaagcagcctgcatcacaaatgcaacagtgcc
aaacaccgtatcatctccccgaaagtagacccacgcaccggtggtgcctacagcagcacc
cactctgaggttcaaaacaacgacgtgtcagaaggaaaaacggagcacagccacggtggg
ggcaaaaatggcagggcagggaacgaaggtgccggcggaacgggtggccgagagaaaagg
aacggcaaggtgcacaagccagcactgctccaccagaacagcatggaggtgtcctcatcc
aaccaggtggaagtgccggataccacccagagctcacccgtctccattagcagtgggcta
aactctgaccccgatatggccgacagtcccgtggtgacaggaatgggccacgtagcttcg
gtaatgagcagcctgtctcaatctgccactgtattcatgtcagaggtgtctggagaccct
gtctatagcatgtcccccactgtagaccccaatgctcacctgttgggtcctgatacagcc
tcaagcagtctggtattagcagtgacagccgacagtcacaaatttgcctttgctggagca
gttggagtggggttagcggatgggggatccaccgacggacttgctatgctgtcatcggca
ggcgtatctgaagaactggtgctgtctagtaacctggaatctggaagtatcaagctgcca
gagaccaatatgaatttcgaccctgactgcttcctcaacaaccccaagcaaggtcaaacc
tatggtggaaatggaatgaaaactgaggagagcaacgggagtagctgcagtaacggaggg
ctgcgatgttccccaccactcaacgacaacggttatggcttcaacaccgctctagtgaag
aacatcaaaacggaggacacgtcatttgagcagcagttggcgaaagagggtggctatcag
gttggagaagtggtgagtggtgccgtcggtatctctggttcctcaaacggcggttctggc
cagaactccctggctctgactcctactggttcactcctgccatctggaggtggacttagt
cccagcactactcttgagcagatggatttcagtgcaattgatgccaagcaagactatcca
accagtgttatgtcagcggcaggctacgcccaatctatctccagctctcacctggcccac
cagagtcactcccccagtttcttcctgcaaggttcgccacagtcccaaaaccagacacac
ccaaacaactccagttcgacccagaactctcacgactccaatgcctactcaacgggaacc
aacgggcatctccaccaccatcaccatacccaccccagccagcacactgcctcgaactgc
aacggcggctctccaaccgaacggaatggacaggctggttcactccagcttctgcagtac
cagaatcgctttccaaccccaggtcaggaacatgaagaagtaggtggtttggaacagcca
atcggagcagagcaaggagacggaggtgttcaagaaaaggactcggatggtctgatgaaa
ccaggggaccacttgcagcctggtgaaggaggagaaaccgaaggcgtaggtggcgaagag
cactacctccagaacccaacagaaggtggtggagtcgggccaggatctggaggaacaagc
gcgagggctgaaagtggaacaatgtgcaatgacaccgagggaaatggaaccaccaacagc
ccccatcaacagctccagccactcctgcaaggagccggtttggtgcaggggctttttagc
accgtaggcacccaccagagcctggccaatagtggaaccaacggaggaggctccatggag
atcaacctcgatcattttgatgtttcctttgggaatcaattctcagatctcatcaatgac
ttcatttcggtggagggtggaagtggtacggctgtagtggcaggcagcaatgctctctac
agccatcagctgatgacccattcgggaacagaggggcaggtctcctctggaaccgctgcg
cagcaaggtgccgatgaagtagcacatggggcaagggggtacaattctgcggacctctgc
ttgcagccctgttgcagcccacagtccacgcaggctggggcggtggcgggcgaggctggg
cagctggcatacatgcaggtggccgaggccgtgtcggcagctgtggcgcatggaaacatg
ggaatgttacaggctactggaaggctgtttgtggtgacggactattctccagagtggtct
tatcctgagggtggtgtgaaggtgctgatcaccggtccatggcaggaggccagcagtgaa
tatacctgtctgtttgatcagataacagttccagcttccctcatccagcccggggtgcta
cgctgttactgcccagctcatgacacaggcctggtgaccctgcaagtggcagccagcagt
caaatcatctccaactcagtggtgtttgaatataaagcccgtgccctgcctgccctgccc
tcttctcaacacgactggctctcactggacgataaccagttcagaatgtccatcctggaa
cgcctagagcagatggagcgaaggatggcagagatggccggtcagcagcagcagcaacag
agcagtggaggaccatctgagagcggaggaaccggaacaggaggaggagaaggaggaaga
agcaattccgaacaggcacagttctcaccaggtcagggtcagagccagggtcaaggtccg
gctggcaactcctttgaaagccgtgtggtggtagtttgcgaaaagatgatgaaccgcgcc
tgctgggccaagtccaagcacctgatccactccaagacgttccggggcatgactcttctt
catctggcagccgcccagggctacaccacccttatccaaacacttatcaagtggcgcact
aagcatgcagacagtattgacctggaacttgaggttgatcctctaaatgtggatcatttc
tcttgcacaccactgatgtgggcttgcgctttgggtcatatggaagcagcagtggttctg
tataaatgggatcggcgagctttggccatcccagattctttggggcgcttaccgctggcc
attgcccgttcccgtggccacaccaagctggccgagtgtctggaaagccttcaaagggag
gagcagcagtcaggagcactgacttcaactcccagcatgactttttcaccatctactgag
gcctcagccgcagagggatggatgaatgtttggggtacagagacatcttcagttgggctg
aaagaaagcaacttgactagttctgcttccagctccagctcagacttgaggagacccagg
tcagaaccatccagcttctacagcagcgttagtcacggggacgccccgttgagcaagaaa
cacaaacccaaccccgagacccttcaaactcggcccagcaaaccctgctctgctcctgtc
ggactagaagaacaggcccacaagcctaaaacgtgcccttccaaaccgagggaaggtact
ggggagaaagagcagggagatggtgagcagtctcagactaagctgggctcaaattgtgga
ggtggatgctggggctccagacaggctgcaggacgcagagtgccaactgcaggacttggc
aaggaaaggctcgcgaacagactgagattaagagagattgctagtgcgggaacaatctct
gatctgcggacaacccaagaggatctggagaacacaggagacttgcagaacatgaacatg
atgactttagcagaggaagtcattgaggcaacatctgatcgcatcaagagggaaaacttt
gttgcatcagacactacactagatggtgttggagtcagcaacaccatgagctggttggcc
agttaccttggagatgcggaaaggttcctgtttaacaagcccctaacttcctctcctggc
ctgggcccagtccacggtggaggacagccggaactcgacggtcctcttgggaagctcggc
ctccagacccccgctgaatggaccgcactcctcaatgcctcccacaacaaggaggagcgc
gacctgacccagttggccctgtctgatcctgaacagagagaactttacgaggcagcccgc
caggtccagaacaccttccgcaaatacaagggtcgtccacttcgggagcagcaggaactg
gcagctgctgtcattcagcgctgttataagaggtacaaacagctgacatggatagccttg
aagtatgcactttataagaagatgacgctggccgccatccttatccagagtaaattccgc
agctaccacgaacagaagaagttccagcagagtcgcagggcagccgtgctgatccagcaa
tattaccgcagctacaaagagctcggccggccgaacccacgcagccgagccactgcagct
gcactggtgcagcacaaactcagaagcagtttactgaccaagagacaagaccaggctgcc
agaaaaatcatgcggtttctgctgcggtgccgtcacagccccttgatggaccatagacta
ttcaaacggggcgaaagaattgagaaaggccaaggaacatga
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integrated database retrieval system
