Labeo rohita (rohu): 127172805 Help Entry 127172805         CDS       T09007                                  Name (RefSeq) filamin-B isoform X1   KO K27392   filamin-B Organism lroh  Labeo rohita (rohu) Pathway lroh04510   Focal adhesion Brite KEGG Orthology (KO) [BR:lroh00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127172805  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:lroh04812]     127172805 Cytoskeleton proteins [BR:lroh04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      127172805   Intermediate filaments    Intermediate filament-binding proteins     127172805 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Filamin CH Big_3_5 Y_Y_Y DUF5060 Invasin_D3 CFSR CH_2 OmcA-like_N Motif Other DBs NCBI-GeneID:  127172805 NCBI-ProteinID:  XP_050978167 LinkDB All DBs Position 11:14832053..14940453 Genome browser AA seq 2604 aa AA seqDB search MPATEKDLADDAPWKKIQQNTFTRWCNEHLKTVNKRVADLQLDLSDGLRLISLLEVLSQK KMYRKYHPRPTFRQMKLENVSVALEFLDRENIKLVSIDSKAIVDGNLKLILGLVWTLILH YSISMPVWEDEDDDEAKKQTPKQRLLGWIQNKVPDLPITNFNQDWRNGRALGALVDSCAP GLCPDWEIWDGEKPVENATEAMQLADDWLGIPQVIAPEEIIDPSVDEQSVMTYLSQFPKA KLKPGAPLKPKLNPKKARAYGPGIEPTGNRVMRPAVFTVDTFSAGQGQVTVYVEDPEGRR EEIKPVLNEGKKTYSVTYIPQVMGPHKVTVLFAGQQIPKSPFEVNVDKALGDATKVTAKG PGLEPLGNIANKPTYFDIYTAGAGVGDVTAVIKDPLGNKNTVEAIMEDKGESVFRCTYKP IQAGPHTINITFGGVAIPKSPFTVNIGPASVPGACRATGRGLQPRGVRARQVADFKVDTR NAGSGDLKITVKGPKGLEEPVKQKDAADGVYSYEYYPNTPGKYTVTITWAGQHIPKSPFE VQVGPEAGPQKIRAWGPGLEGGVVGKSADFVAESIGTDVGVLGFAIEGPSQARIECEDQN DGSCNVRYWPTESGEYAVHVMCDDEDIEDSPFMAYIVSDNKANNPNQVRAYGPGLEKSGC IINKPAEFTVEAKDAGNGPLRIIAQDADGVPIDVKVKSKGDNVYSCSYTPTSAVKHTLAV TWGGVSVPNSPFRVNVGKGSHPHKVKVFGPGVERSGLKAHEPTHFTVDCTEAGEGDVSVG IKCDANVISDKEEDVDFDIIPNANDTITVKYIPPGAGRLTIKVLFTDQEIPISPFRVKVD PSHDSSKVKAEGPGLARAGVESGKPTHFTVYTKGAGKAPLDVQFSGPNKGQPVQDFEVID NYDYSQTVKYTPVQQGEMVITVTFGGDPISKSPFAVGVAAPLDLSKIQVDGMENRVQVGE DQEFAIGTKGAGGQGKLEVKITGPSGKSVPCVVEPQPGKGASLVKYVPKEEGVYVVEVVY DGNPVPGSPFTVEAMLPPDPSKVKAFGSGLKGGLVASPAEFTIDTKGAGTGGLGLTVEGP TEAKIECSDNGDGTCSVSYLPTEPGEYLVNILFEDVHIPGSPFHASIQYPFDPTKVVASG SGLKRGKVGEISVLNVDCAKAGPGQLTLEAESDSGAKAKTEVVDNKDGTYTVTYVPLTAG MYTLLLKYGGKNVPKFPAKVQVDPAVDTSKVKVFGPGVAGEGVFREATTDFTVDAQALTK VGGKHIKAHVKNPSGAATDCVVSDNGDGTYNVEYTPFENGVHSVEVLYDETPVPKSPFQV GVGEGCDPSRVQAKGPGLEQALTDKPNKFSIVTRGAGIGGLGITVEGPSESKMSCKDNKD GSCNVEYTPYVPGLYDVNITYGGQHIPGSPFKVPVKDVIDSSKVKISGPGVSSGVRAKVP QSFTVDCSKAGVAPLSVAVTGPKGIAEPVEITDNGDGTHTVAYTPSVEGSYSVAVKYADE EVPRSPFKLRVQPTHDASKVRASGPGLTTGLSASFPVEFTIDAKDAGEGQLSVQITDQDG KPKKANIQDNRDGTYKVSYVPDKVGRYTIVIKYGGDEIPTSPYRVRATTTGDASKCTVTG PGIGPTIGIGEEVGFVVNTKGAGKGKVSCIVVTPDGTEVEAEVIENEDGTFDIFYTAPKP GTYVIYVRFGGENVPRSPFKVMATDEVPVTQQQSVQQQKAAPGVGFQPWVTDGTYIPANS VNGTGYRPFDMVIPFTFRKGEITGEVHMPSGKTAQPEIIDNKDGTVTVKYAPTEAGLHEM HIKYNGTHIPESPLQFYVNNANSPNVTAYGPGLVYGTANKTAMFTIYTEDASEGGLDLAI EGPSKAEINCVDNKDGTCTVSYLPTLPGDYNILVRYNDKHIAGSPFTARITEDNKRKSQV KLGSAADFSLDINETDLSLLTASIKAPSGRDEPCLLKRQPNNHIGISFIPREVGEHLVSI KKNGRHVANSPITIMVVQSEIGDASRVKVFGQGLVEGRTFEMSDFVVDTREAGYGGLALS IEGPSKVDIQTEDMEDGTCGVSYCPTEPGTYIVSIRFAEEHVPGSPFSVKVTGEGRIRES ITRRQKAASVASVGSVCDLNLKIPEIDLKDVSAQVTSPAGATEAAEMVAVGNNTYCVRFV PHEMGVHTVSVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGPGLEKAEMGVPAEFNVWT REAGAGGLSIAVEGPSRAEISFEERKDGSCGVSYVAQEPGDYEVSIKFNDEHIPESPYLV PVYAPADDARRLTVTSLQESGLKVNQPASFAVRLNGAKGHIDAKVHSPSGALEECVVSEL EQDKYAIRFIPRENGIHVIDVKFNGTHIPGSPFQVRVGEPGQSGDAGLVTAYGPGLERGT TGNQAEFTINNTKAGPGSLAVTIEGPSKVKMECQECPEGFKVHYTPMAPGNYVITIKYGG PNHISGSPFKAKVTGPRLVNVTNASEMSTLTVDPVSRASSVNSYSSSPRAASDASKVLSR GPGLSKAFVGQKASFSVDCSKAGKNMLLVGVHGPLTPCEEILVKHMGGMQYNVSYVLKER GNYILAVKWGDEHIPGSPFQVTVP NT seq 7815 nt NT seq  +upstreamnt  +downstreamnt atgccggccacagagaaggacctggcggacgacgcgccgtggaagaagatccagcagaac actttcacccgttggtgcaacgagcacctgaagaccgtcaacaagcgcgtcgccgacctg cagctggacctgagcgatggactgcgactcatctcgctgctcgaggtgctcagccagaag aagatgtacagaaaatatcaccctagacccactttcagacagatgaagctggagaacgtg tccgtggcgctcgagtttctggacagggagaatataaagctcgtgtccatcgacagcaaa gcgattgtggatgggaacctgaagttgatcctgggtctggtgtggacgctcattctgcat tactccatctctatgcccgtctgggaggatgaagatgacgacgaagccaagaaacagacg cctaagcagagattgctcggctggatccagaacaaagtgcccgaccttcccatcaccaac ttcaatcaggactggaggaacggccgggcgctgggcgctctggtggacagctgcgctcca ggcttgtgtcctgattgggagatctgggatggggagaagccggtggaaaacgccacagag gccatgcagctcgctgatgattggctgggaatcccacaggttatagctccagaggagatc attgaccccagtgtggacgagcagtcagtcatgacgtatctgtctcagttccccaaagcc aaactgaagcccggcgctcctctcaaacccaaactcaaccctaagaaggcgcgcgcgtac ggcccaggcatcgagccgaccggaaaccgtgtgatgcgtccggccgtgttcacagtggac accttcagcgcgggtcaaggccaggtcacggtctatgttgaagacccagagggccgcagg gaggagatcaaacctgtgctcaatgaaggcaaaaagacctacagtgtgacgtacatccct caggtcatgggaccacacaaggtcaccgtgcttttcgctggacagcaaatcccaaagagc ccgtttgaggtaaatgtggacaaagccctgggagacgccactaaagtcacagctaaagga cccggcctggagccgctgggaaacatcgccaacaaacccacctactttgacatctacacc gcaggtgctggtgtgggagacgtgacagccgtcatcaaagaccctctgggtaataaaaac acagtggaggccatcatggaagacaagggcgaaagcgtcttccgttgcacctacaaaccc atccaggccggccctcacaccatcaacattacattcggaggcgtcgccatccccaagagc ccctttaccgtcaatatcggcccagcgtctgttcccggagcgtgtcgagccaccggtcga ggtctgcagcccagaggtgtgagagcgcgtcaggtggccgattttaaggtggacacccgt aatgctggtagcggagatctgaagatcaccgttaaaggacccaaaggtctagaggagcct gtgaaacagaaggacgctgcagatggcgtttactcttatgaatactatcccaacacacct ggcaaatacaccgtcaccattacctgggccggacagcacattcccaagagccccttcgag gttcaggtgggccctgaagccggaccacagaagatccgcgcatggggtccgggtctggag ggaggtgttgtgggaaaatccgcagactttgtggccgaatccatcgggactgatgtcgga gttctcggatttgccatcgaaggtccatctcaggcccggatcgagtgtgaagatcagaac gatggctcgtgtaatgtgaggtactggcccaccgaatcaggcgaatatgctgtccatgtc atgtgtgatgatgaagacatcgaagacagtcccttcatggcctacatcgtttctgataac aaagcaaacaaccccaaccaggtcagggcttatggaccgggactggagaagagtggctgt atcataaacaaacctgctgaattcaccgtcgaggccaaagatgccggaaacggcccactg agaatcatcgcacaggatgcggatggagtccccatcgacgtgaaggtgaagagcaaaggc gataacgtgtattcctgctcgtacacgccgacctcggccgtcaaacacacgctggcggtg acctggggaggcgtcagcgttcccaacagccccttcagggtgaatgttggaaagggaagc caccctcataaagtcaaagtgtttggtccaggagtggagagaagcggactgaaggctcac gagccgacgcacttcaccgtggactgcactgaagctggagaaggtgacgtcagtgtcgga atcaagtgtgatgccaatgttatcagcgataaggaagaggatgttgattttgacatcatt cctaatgctaatgacaccattactgtcaaatatattcctcctggggccggacgactcacg atcaaagtgctttttactgatcaggaaatcccgatcagtccgttccgtgttaaagtggat ccttcacatgactcctccaaagtgaaagcagagggaccaggactcgctcgagcaggtgtg gagagtggaaaaccaacacacttcaccgtttacaccaagggggctggcaaagctcctctg gacgtgcagttttctggacctaataaaggacagcccgttcaagactttgaagtcattgac aattatgactattcccaaactgtcaaatacacaccggtccagcagggagagatggtgata acggtgacctttggtggagaccccatttctaaaagccccttcgctgtgggtgtcgcagct cctctggaccttagcaagatccaagtggatggcatggaaaatcgtgtgcaagtgggtgag gatcaagagtttgccattggtacaaagggagcaggtggacagggcaaactggaagtcaag atcaccggcccatcaggaaagtccgtgccctgcgtggtagagccccaacctggtaaagga gccagtctggtgaagtacgtccccaaagaagagggcgtatatgtggtggaggtcgtctac gatggcaatccagtgccgggaagccccttcacagtcgaagccatgctgcctcctgatccc agcaaggtcaaagcgttcggttcgggactgaagggcggtctggtagcgagtccagctgag tttactattgacactaaaggcgctggaaccggtgggctcggccttaccgtcgaaggtcca accgaagctaaaatcgagtgctccgacaacggcgacggcacctgctctgtctcgtacctc cccaccgaacccggagagtatctagtcaacattctcttcgaggacgtccacattcccggc tcgcccttccacgctagcatccagtacccgtttgatcccactaaagtggtggcgtccggt tcaggactgaaacgaggcaaagtaggcgagatcagcgtgctgaacgtcgactgcgccaaa gccgggccgggccagttgacgctggaggccgagtctgattctggagcgaaagccaagact gaagttgtggataacaaggacgggacctacacggtcacctacgtcccgctgacggcgggt atgtacacgctactgctgaagtatggaggaaagaacgttcccaaattccccgccaaagtg caagtggatccggctgttgataccagcaaagtgaaggtgtttggaccaggagttgcagga gaaggagttttcagggaggccacgactgacttcactgtggatgcacaagctttgaccaaa gttggtgggaaacacattaaagctcatgtgaagaacccatcaggtgctgccacagactgt gtcgtcagtgacaatggcgatgggacttacaacgtggaatacacaccgtttgagaatgga gtccacagtgttgaggttctgtacgatgagactccggttccaaagagtccgttccaggtt ggggttggcgaaggatgcgacccctcacgtgtgcaggccaagggccctggtctggaacaa gcactcactgacaaacccaacaagttctccattgtcaccagaggagcgggtattggtgga ttgggaataaccgtagaaggtccatcagagtcgaaaatgtcctgcaaagataacaaagat ggcagctgtaatgttgaatacaccccatatgtgcctggtctgtatgacgtcaacatcacg tatggaggacaacacattcccggaagcccatttaaggtgccggtgaaggatgtcatcgac tccagtaaggtgaagatctctgggcctggtgttagttctggagtgagagctaaagtccca caatccttcactgtggactgcagtaaagctggcgtcgctcctctctctgtggccgtgact ggacctaaaggtattgccgaaccggttgaaatcacagacaacggtgatggcacacacacg gtggcctacacgccgtctgtcgagggctcgtactctgtcgcggtcaaatacgcagatgag gaagttccacgcagtccgttcaagctgcgtgttcagcccactcatgatgccagtaaggtg cgtgccagcggccccggcctgaccaccggcctctctgccagcttccctgtggagttcacc atcgacgccaaggacgcgggcgagggccagctgtctgtgcagattaccgatcaggatggt aaacccaagaaagccaacattcaggacaaccgcgatggaacctacaaagtgtcttacgtg ccggataaggtgggccgttacactattgtgatcaagtacggcggagatgagatcccgact tctccatatagagtgagagcgacaactacaggagatgccagcaagtgcacagtcacagga cctggcatcgggccgaccatcggcatcggagaggaggtcggttttgtggtgaacactaaa ggagcggggaaagggaaggtctcctgcatcgtcgtcactccggacggcactgaggtggaa gctgaagtcatcgagaacgaggacgggacctttgacatcttctacacggctcctaaaccc gggacgtacgtgatttacgtgcgcttcggaggggaaaacgtccccaggagccctttcaaa gtcatggccacagatgaagttcctgtgacgcagcagcagtcagtccaacagcaaaaggcg gcaccaggcgtcggcttccagccctgggttacagatggcacgtatattcctgccaacagc gtgaacgggacggggtacaggcctttcgatatggtgattccctttacctttaggaaaggg gaaatcacaggtgaagttcacatgccgtcaggtaaaaccgcccagcctgagatcatcgac aacaaagacgggacggtcacggtgaaatacgcacccactgaggctggactccatgaaatg cacattaaatacaatgggacacacatcccagagagtcctctgcagttctacgtcaacaac gcaaacagtcctaacgtgacggcgtacggtccgggtctggtctacggtaccgccaataaa accgccatgttcaccatctacactgaagatgcgtctgagggcggccttgatttggcaatt gaaggtccatccaaggcagagataaactgtgtggacaacaaagacggcacttgtacggtt tcatacctgcccacgctgcctggagattacaatatactcgtcagatataacgacaaacac atcgcaggaagccccttcacggccaggatcacagaggacaataagaggaagtctcaggtg aagctgggctctgctgcagatttctctctggatatcaacgaaacggatctcagtcttctc accgcgagcatcaaagccccgtctggtcgtgatgagccctgtttgctcaagaggcagccc aacaaccacatcggcatttccttcatcccaagggaagttggagagcacctggtgagtatc aagaagaacggccggcacgtcgctaacagccccatcaccatcatggtggtccagtctgag atcggagatgccagcagagtcaaagtgttcggtcagggtctggtggagggacgcactttc gagatgtctgacttcgtggtggacacaagggaagctggttacggcggtttggcgttgtcc atcgagggtcccagtaaggtggacattcagacagaggacatggaggacggaacttgtggc gtctcatattgtcccactgaaccgggaacctacatcgtgtccatcagatttgcagaagag catgtcccaggaagtccatttagcgtgaaagtgaccggcgaaggtcgtatccgcgagagc atcactcgccgtcagaaagcagcttccgtcgctagtgttggaagtgtttgtgatctcaac ctgaagatcccagaaatcgaccttaaggacgtctcggcgcaggtcaccagcccggcggga gccacggaagcggctgagatggtggcggtgggaaacaatacttactgcgtgcgcttcgtg cctcacgagatgggcgttcacacggtgagcgtgaagtaccgcgggcagcacgtgccagga agccccttccagttcaccgtcggcccgctgggtgaaggtggagcacataaggtgcgagca ggaggtccgggtctggagaaggcagagatgggagtgccagctgagtttaacgtgtggaca cgtgaggcgggtgctggcggtctgtccatcgctgttgaaggtcccagtcgtgctgaaatc tcctttgaagaaaggaaggacggatcatgcggcgtctcatatgtagctcaagaacctggc gactatgaagtgtctataaagttcaatgacgagcacattcccgaaagcccatacctggtg cccgtttacgctcctgcggacgacgctcgtcgacttactgttaccagtcttcaggagtcg ggtctgaaggtgaaccagccggcatcgtttgcggtgcgtctgaatggggcaaaaggccac atcgatgccaaagttcacagtccgtctggagccctggaggagtgtgttgtgtctgaacta gaacaagacaagtacgccatccgtttcatcccgcgagagaacggcatccacgtcatcgac gtgaagttcaacgggacgcacatcccgggcagtccgttccaggtccgcgtgggagagccg ggacagagcggcgatgcgggactcgtcaccgcttacggccccggtctggaaagaggaacc acaggtaaccaggccgagtttaccatcaataacaccaaagcagggccgggatctctggct gtcaccatcgagggcccgtcgaaggtgaagatggagtgtcaggagtgtcccgaaggcttt aaagtgcactacacaccaatggcccctggaaactacgtcatcactatcaaatacggcggc cccaaccacatcagcggaagcccgtttaaggccaaagtcacagggccgcggctggtgaac gtgactaacgccagcgagatgtccactctgacggtggatccggtgagcagggcgagcagc gtcaactcctacagctcttctccaagggccgcttctgacgccagtaaggttctcagtcga gggccgggtctcagtaaggccttcgtaggccagaaagcatctttctctgtggactgcagt aaagcaggcaagaacatgctcctggtgggcgttcacggtcctctgacgccctgcgaggag atcctggtcaaacacatgggaggcatgcagtacaacgtcagctacgtcttgaaggagcgg ggcaactacatcctggctgtgaaatggggagatgaacacatcccaggctcccccttccaa gtcaccgtcccataa

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