Labeo rohita (rohu): 127172827
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Entry
127172827 CDS
T09007
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127172827 (arhgef10la)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172827 (arhgef10la)
Membrane trafficking [BR:
lroh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127172827 (arhgef10la)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127172827 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
SOS1_NGEF_PH
CFAP43_N
DUF7675
Beta-prop_EML_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
127172827
NCBI-ProteinID:
XP_050978217
LinkDB
All DBs
Position
11:22350964..22763402
Genome browser
AA seq
1267 aa
AA seq
DB search
MSTASSHQYLEKDVEEEEQREKFKSEDEIDKQKGKTTSGDEAAKCSEPQTHSNELEGTQE
KQADHLSQVVTTVSPGGQECTSHNTNLSTTNKRDQASTDSAAPANLNEKEDQTCTEVKTE
RETCTVETDTGTEDITHSPAQNAEDEASADSEHQTAGPEVIYDDVPCEDLSSGEADLIYE
DIQKEEGLQGPNNGWSSSEFESYDEQSDSERAPTRSKLSPDVRRLRERYTRTKQELTMRL
GGRHQVHQLMRAARSGTKDGLEKTKIAVMRRVSFLQKKDHSDDTEDDTGYLDVMVSEAKH
PPAQLGPMPDGLSSQQIVRRHILGSIVQSERSYLDSLKRILQEYQRPLMEAEPRILSVRK
IRPIFFRLREIMQCHSMFQIALASRVAEWDSCEKIGDLFVASFSKSMVLDVYSDYVNNFT
NAMALIKKACMSKPAFLEFLKKKQASSTDRITLYGLMVKPIQRFPQFILLLQDMLKNTPT
GHVDRLPLQLALTELETLAEKLNEQKRVADQITETQQLARCVSDRSLSKLLNSEQSSLIL
GETLIETVYGERGQVLKSKERKVFLFGDMLICANINVKGPPDISSLVPVGPKYTLKWSAP
LQQVQVVEVGQEGSQTKDTLYQLGGVKRPGGSSGSGSIILGPPRLYQELQELQHDLSVVE
QVTLLVGTLQGTYQNLNTTVAQDWCLALQRLIRIKEDQIQSANKCRLRLQVPGRPDKSGR
PVSFTVVFNTPSPVSKISWVNRLHLAKIALKDENTPGWFSAEDDGKTKAPFWCPLLACRI
PVFTSRAQEWKLEAALHNRVQCALLGFSAASTSLPQGYLWVAGGGDSTQGQVDIFSLNRP
TPRPVKSLQMGARVRCLEYVPEPSPLEDAETGPHTSTGVGNTICVGLDDGSILVYGSMDT
AAQCLVTLRNPEGCPVLCLKHCRNFLFAGLRDGTLMVYERRSGGELWNQDSCRKVTVGSD
PIRTLLALEDSVWASCANTVTVVHVSSLSTQRFEVHQDPMVSVAHMVRAGGGVWMAFSEG
SSIRLFHTETLEHLQEINISTPSSFYNPSQKSMRVTSLLICQGLLWVGTAQGIIITLPVP
KLEGIPKITGKGMTSLNAHCGPVDFLVALSSTLSPDLLKRDSIVEGHDSACGVEDRSDSS
SQESLQQPSISAHVDVKGKGRGVLLQYRLRSTSGLPGRPLTARGDEASDSSLESLEHSME
DGSIYELSDDPDMWVKGRPSERDGVRRDRVTSVAVISGGKGFRRLREGSVATTIESTLMI
WQLPLTV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagcttcatctcaccagtacctggagaaggatgtggaggaagaagagcagaga
gaaaaattcaaatctgaagatgagattgacaaacaaaagggcaaaactacctctggagat
gaggccgcaaaatgcagcgagcctcagacacattcaaatgaattggaagggactcaggaa
aaacaagcggatcatttatcccaagtggtcactacggtttcccccggtggacaggaatgt
accagtcataacactaatctgtcaaccaccaacaaaagagaccaagcttccacagactct
gctgcaccagcgaacttaaatgaaaaggaagaccagacttgcactgaggtgaagaccgag
agggaaacatgcactgttgaaactgacacaggaacagaggatatcacacacagcccagca
caaaatgctgaagatgaagcctctgctgattcagaacaccagacggctggtccggaggtg
atctatgatgatgtaccctgtgaagatctgtcttcaggagaagctgacttgatctatgaa
gacattcaaaaagaggagggcttgcaagggcccaataatggctggagctcaagtgaattt
gaaagctatgatgagcagtccgactctgagagggcgccaacccgcagcaagctctcccct
gatgtgcgacgactgagagaacgttacaccaggaccaaacaggagctaaccatgagactg
gggggcagacatcaggtccatcagctgatgcgggcggcacgtagcggaacgaaagatggc
ctggagaagaccaaaatcgccgtgatgagaagagtttcattcctacaaaaaaaggaccac
tcagatgacactgaggatgatactggatatctggatgttatggtatcagaggcaaaacac
ccacctgcacaactgggaccaatgccagatgggcttagcagccaacagattgtcagacgt
catattttgggctccattgtgcagagtgagagaagttacctggactctcttaaacggatc
ctacaggaataccagcgacctctgatggaggctgaaccaaggattctcagtgtcaggaaa
atccggcccatttttttccgtctgcgggagatcatgcagtgccactccatgttccagatt
gccctggcatctcgggtggccgaatgggactcttgtgaaaagattggggacctgtttgta
gcttcattctcaaaatccatggtgctggacgtatatagtgattacgtcaataacttcacc
aatgccatggccctcattaagaaagcctgcatgtctaaaccagcatttctggaatttctc
aagaagaagcaggcgtccagcactgaccgcataactctctatggtctgatggtgaagcct
attcagcggtttcctcagttcatactcctcctgcaggacatgctgaagaacactcccact
ggccatgtggacaggctgcccttgcagttggcactgactgaattggagacccttgctgag
aaactcaatgagcagaaaagggtggctgatcagatcactgagacgcagcagctggctcgc
tgtgtcagtgaccgctctctcagcaagctgctgaactccgagcagagctctttgatcctt
ggcgagacgctgattgagacggtgtacggcgaacgaggacaggtcctcaagtctaaggag
cgaaaagtctttctcttcggcgacatgctcatctgtgccaacatcaatgtcaagggcccc
cctgacatcagcagtctggttccagtaggtcccaagtacaccctgaagtggagcgccccc
ttgcagcaagtccaggtagttgaagtgggtcaagagggctcccagaccaaggacactctt
tatcagctgggaggcgtcaagcgtccaggcggctcttcgggatcgggaagtatcattctg
ggtccgccccgtctgtatcaggaactgcaggagttgcagcatgacctctcagtggtggag
caagtcactctgctcgtggggactttacagggaacgtaccagaatctgaacactactgta
gcacaggactggtgtttggcgctgcaaaggctgattcgcatcaaggaggaccaaattcag
agtgccaacaagtgccgtttacgacttcaagtccccggcagaccagacaagtctggtcgt
cctgtgagcttcacagtagtcttcaacacaccgagccccgtcagcaagatctcctgggtc
aaccggttgcacttagcgaaaatagcactgaaagacgaaaacacaccgggttggttctcc
gcagaggatgatgggaagacaaaagctccgttttggtgtccactgctggcctgtcgcatt
cctgtcttcacttccagagcccaggaatggaagctggaggctgctcttcataatcgtgtt
cagtgtgctttacttggtttctccgcggcgagtacttcacttcctcaaggctacctatgg
gtagccggtggaggtgattccactcaaggccaggtggacatcttctccttgaacagaccc
acacctcggcctgtcaaatccctccagatgggagctcgagtgaggtgtttggagtatgtg
cctgagcccagccctttagaggatgctgaaaccggccctcacacctccacgggagttgga
aatactatctgtgtgggacttgatgatggcagcattctggtctatggcagtatggacacg
gccgcccagtgtctcgtgactctccgtaaccccgagggctgtccagttctgtgtctcaaa
cactgcaggaacttcctgttcgctggccttcgggatggaacgctgatggtgtacgagaga
cgtagcggaggggaactgtggaaccaggactcctgtagaaaagtaacagttggttcagat
cccatcaggacactgcttgccttggaggactcggtctgggctagctgtgctaacacagta
actgtagttcacgtctccagtttgtccactcagagatttgaggtccatcaggacccgatg
gtaagcgtggcccacatggtgcgagccggcgggggcgtatggatggccttttcagaaggt
tcctctatacgcttgttccatacagaaacactggagcacctgcaggagatcaacatatct
acaccctcgtcgttttacaaccccagtcagaagagcatgagagttaccagcctgctgatt
tgccaggggctgctgtgggtgggaactgcccagggcattatcatcaccctgcctgtgccc
aagctggagggcatccccaaaattacaggtaaggggatgacgtctctaaatgcacactgc
gggcctgtggatttcttagttgccctttccagcactttgtctcctgatcttctgaagcgg
gattctattgtggaagggcatgattcggcctgtggagtggaggaccgcagtgactcgtcc
tctcaggaatctctccagcagcctagtatttccgcccatgtggatgtcaaagggaagggg
cggggcgtgttgctacagtaccgcctccgctcaacctcaggtttgcccggacgaccttta
accgcgagaggggacgaagcctcggactcgtctttagaatctttggagcacagcatggaa
gatggctctatatatgaactcagtgatgatcctgatatgtgggtcaagggtcgacccagc
gagagggatggggtgaggagagacagggttacctcagtagcagtcatctctggtggaaag
ggcttccgaaggctgagggagggttcggtggcgaccaccatagaaagcacacttatgatc
tggcagcttcctctcactgtttga
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