Labeo rohita (rohu): 127172851
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Entry
127172851 CDS
T09007
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127172851 (wdr18)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
127172851 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
WDR54
Ge1_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
127172851
NCBI-ProteinID:
XP_050978257
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Position
11:complement(8127961..8209894)
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AA seq
431 aa
AA seq
DB search
MSAPVEVVLSADSAGQLFNCAVYDPHSGSEFLSYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLHVLAGIAETIYLWEMSTGNLLAILSRH
YQDVSCVRFTDDSSHFVSGGKDNLALIWNLSSVVQLDSSRTPEPRHILSRHSLPITDIHC
GLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSTSLSRDKTFQTDSDGNQVFKGHRNLVTCLSVSMDGTLLLSGSNDETVRMWDVQS
KQCIWSINHKGPVTNAAIIPAPANMFLADSHPAIPLPRFSRHLNPSEQGDGMGSGGVCLR
LGANTQEPEGTHLEKADELYSLMCAVTDKSVFGDGENTKVRVSELEEEVKTLKKINKDLY
EFSTQLLTKPN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccgtggaggtagttctgtctgcggattcagcgggtcagctgtttaactgc
gcggtttacgaccctcattccgggtcagaattcttgtcctatcgcgggggtaacacttcc
tccaggtctttaacagtcctgaacggagaatacatattaggagctcaactcggcaagaac
ttcatcaacgtgtgggagatccaaagaaaggaccagctgcagcagaagattgtgtgtccc
gggatcgttacgtgtctctgtgcatctcctgatggactccatgtactggcaggcattgct
gaaactatatacctgtgggagatgtcaacaggaaatttgctggccattttgagtcgacac
tatcaggacgtgagttgcgtccgtttcactgatgacagcagtcattttgtgtcgggaggg
aaggacaatctggctctcatttggaatctctccagcgttgttcagttggattcgtcccgc
acaccagaaccgcgtcacattctttctcgtcactccctccccatcaccgacatccactgt
ggcctaatgggaccgcaagcccgtgttgccaccgcatccctggaccaaaccgttaaggtc
tgggaaatttcctctggggagatgctcctgtccgtcctcttcgatgtcggcatcatgtcg
gtgacctttgacccttgcgagtatttcctcttctgcggaggcagtgacggcaatattttt
caggtgtctctctgcagcacgagtttaagccgggataaaaccttccagacggacagcgac
ggcaatcaggtgttcaaaggacacagaaatctggtgacatgtctgtctgtgtccatggac
gggaccctcctgctgtccggctccaatgacgagactgtcagaatgtgggacgttcagagc
aagcagtgcatatggtccatcaaccacaaaggtcctgtgaccaatgctgctatcatccca
gcacctgccaacatgttcctcgctgacagtcatccagccatcccgctgccacggttcagt
cgccacctgaacccctccgagcagggtgacggtatgggctcaggaggcgtgtgtctgaga
ctgggagccaacacacaggagccagaggggacgcatttggagaaagcagatgagctctac
tctctgatgtgtgccgtcacagacaagagtgtgtttggtgatggggagaacactaaggta
cgagtgtctgaactagaggaggaggtgaagaccctgaagaagatcaataaagatctgtat
gagttctccactcagctcctgaccaaacccaactag
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