Labeo rohita (rohu): 127172863
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Entry
127172863 CDS
T09007
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b isoform X1
KO
K21988
transmembrane channel-like protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127172863 (tmc6b)
03037 Cilium and associated proteins [BR:
lroh03037
]
127172863 (tmc6b)
Transporters [BR:
lroh02000
]
Other transporters
Pores ion channels [TC:
1
]
127172863 (tmc6b)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127172863 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Viral_alk_exo
Motif
Other DBs
NCBI-GeneID:
127172863
NCBI-ProteinID:
XP_050978280
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All DBs
Position
11:complement(12833329..12859211)
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AA seq
844 aa
AA seq
DB search
MMHRHAVYQQDDEDRAVSLRSSVSAALIMAGRVGSDSDLVTDIESPADEDGVHNSFSQLI
NEQSHDLHDVIEMTPFDLQEESRDDVVCLEAPPYQRSDSEGPQPTDHLIEERWSSDTLKV
LSSMPSRTIGRSRGAIISQYCNRTMQLRRRRQSRPSIQHFPRSARPSIRGYLVETDGAAF
EEEENKRERLVNNLQNLSAHDRLRMLRAMPLSLAEKKELRMLVLNKAEHSVSQNQIPCYS
QLKYYIIIALRHGWYGWLSFLSSLQLWQTALKRVGGRFGTGVLSYFVFLRTLLFFNVFLF
LVTGLFLVVPQAILHSEHNVTVNSTWGLEVLTGAGYFSHSLLYYGYYSNQRLQTSHKCSV
PKNGMPCSSRLPYNMPLVYFFTIGAAFFITCIILVYSMSKSFGQSFRIDKSKGLLAIKVF
SSWDFKVIKKSSVKLQRANIGTQLKELVAEVNRQKLKFPVLQQLGRFLIHMLAWIMCLGS
TLASVLAVYYFSEHMHKDLRSRALTNSSSIVLKEASLLAVPVVVSSINLLLPGFFNALAW
MEEYDSPSVLNYVSISRNLLLKVSVLGVLCYHWLGRVALDPHGLGLKCWESFVGQELYRF
LLMDFIFMLLDTFFGEFLWRLFSQKALKRKRKPVFDIARNVLELIYGQSLAWLGVLFSPL
LPAVQIIKLLILFYMKKVSLMMNCQASGKPWRASQMTTIFITLLCFPAFLGAAVCVTYTM
WTISPSAGCGPFRGLKTMFQAGKLWVQDLAAENPDLHWLASAHAYLVENPLFLFLSAGIF
LIVIYFHSQVVDGQRKIIELLQEQIENEGEDKKFLITRLQDIHERKRGVPPRRVKGASED
SSYS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacagacatgctgtctatcagcaggatgatgaggatcgggcagtttctttgcga
tcgtccgtgagcgcagctctaatcatggccggaagggtcggttctgactctgatctggtc
actgatatcgagagtccagcagatgaggatggggttcataattcattcagtcagctgatc
aacgaacagtctcatgaccttcatgatgtcatagagatgaccccgtttgacctgcaggag
gagagcagagatgacgttgtgtgtctggaggctccgccgtatcagcggtctgacagcgaa
gggccgcagccaacggatcatctgattgaagaacgctggtcatctgacacgctcaaagtc
ttgtcctccatgcccagtcgcaccatcggtcgcagtcgtggcgcgatcatctctcagtac
tgcaaccgcaccatgcagctgcgcagacgcaggcagagcagaccctccatccagcacttc
cctcggtctgcgcggcccagcatccgcggatacctcgtggaaacggacggagccgctttt
gaggaagaagagaataagagggagcgtctggtcaataatttgcagaatctgtcagcccat
gatcgcctgcgtatgttgagagcaatgccgctgagtctcgcagagaagaaagagctccgg
atgttggtgttgaataaagccgagcactctgtgtctcagaatcagattccctgctacagt
cagctcaagtattacatcatcattgcgctgaggcacggctggtacggctggctgtcattc
ctctcctcgctgcagttgtggcaaacggcgctgaagcgtgtcggcggtcgcttcgggacg
ggcgtcctctcgtatttcgtcttcctcagaacgctcctcttcttcaatgtcttcctgttc
ctggtcactggtttgtttctggtggttcctcaggccatcttgcattcggagcataacgta
accgtcaacagcacatgggggctggaggtgctcacaggcgccggttatttctcacactct
ctgctgtattacggctattacagtaaccaaaggctgcagactagccacaaatgctctgtg
cccaagaacgggatgccctgtagttctagattgccctataacatgcctcttgtttacttc
tttaccatcggcgctgccttcttcatcacctgcattatcctcgtctacagcatgtcgaag
tcgttcggtcagagtttccgcatcgataaatccaaaggcctgttggctataaaagtcttc
agctcgtgggactttaaagtcatcaagaaaagctcagtgaaactccagcgggcaaacatc
ggcacacagctgaaggagttggtggcagaggtgaaccgtcaaaagttgaagtttcccgtt
ctccagcagctgggccggttcttaatccacatgctggcgtggatcatgtgtctgggaagc
acgttagcgtctgtgctagctgtgtattacttctctgagcacatgcacaaggatctgcgt
agccgtgctctcacaaactcgtccagtattgtactgaaggaagccagtctgttggccgtt
cctgtcgtggtgtccagcattaacctgctcctccccggattctttaacgccttggcctgg
atggaggaatatgattctcccagtgtgctcaattatgtctccatcagcaggaacctgctg
ctgaaggtgagcgtgttgggagtgctgtgctatcactggctgggccgcgtggcgttggat
cctcacggtctgggtttaaagtgctgggagagtttcgtcgggcaggagctgtaccgtttc
ctcctgatggacttcatcttcatgctgctggacaccttctttggagagtttctgtggagg
ttgttttctcagaaagctctgaagaggaagaggaagcctgtgtttgatattgcaaggaac
gttctggagctcatctatggacagagtctggcctggttgggtgttttattctctcctctg
ctgccggcggttcagatcattaagctgctgatcctcttctacatgaagaaggtcagtctg
atgatgaactgtcaggcgtcggggaagccgtggcgcgcctctcagatgaccaccatcttc
atcacgctgctgtgtttcccagcattcctgggcgccgccgtatgtgtgacgtacaccatg
tggacgataagcccgtcggcgggctgcgggccgttccgtgggctgaagaccatgttccag
gcggggaagctgtgggttcaggatctggcggcggagaatcccgatctgcactggctggcc
tccgctcacgcctacctggtggaaaacccgctcttcctcttcctgtctgccggcatcttc
ctgatcgtgatttatttccacagtcaggtggtggacggtcagcgcaagatcattgaactg
cttcaggaacagatcgagaatgagggtgaggataagaagttcctgatcacacgactgcag
gacatccatgagcgcaaacgaggcgtgccgccgcgccgtgtgaaaggagccagcgaggat
tccagttattcatga
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