Labeo rohita (rohu): 127172904
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Entry
127172904 CDS
T09007
Symbol
fgd5a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127172904 (fgd5a)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
127172904 (fgd5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
PH_9
IQ_SEC7_PH
PH_20
FYVE_2
PH_11
Motif
Other DBs
NCBI-GeneID:
127172904
NCBI-ProteinID:
XP_050978376
LinkDB
All DBs
Position
11:4068967..4118084
Genome browser
AA seq
1453 aa
AA seq
DB search
MSRPCPSTRGPKPPVAPKPRLASEVSQSIVGNGDITSSDRLELNQDNESDVTQDEADASR
ENCTDDDVENDLSDKEFTVNYDTNHDTSCYNEIEEELQMAVDETVGDNEATEVQHAASSD
FDSADDDHSKDTDDTKPTENGDNAYNVLEDTCETLNEDQPAGESQSPYEEIEEPPSDNDQ
YEENTKAGEAQEDEPGLSSKATTCSQPSLCEEYPYDVIGTLDDNSTWQAERATKDPSGRF
RFAEETEDPFEPYSVIEVVPGDLTCTSDPEARCTDDESSNEKPMDSEIATEEASNQEPYY
VSSDDVAELEDEQAKLENDVSQPASEGQEMAKNEEVDDYADIKDNDGDDPQIECVSSEDY
VEIGDEDEPVNMERKTKGKSVRERSARRGQALLSQRNSCQPRLRLCNITVPADLDVGRTP
ELTNRVVFAHTTEAFEEDIEELDCHIVPFFEDSDTESDEHIYEEAGFDSEGENFISLDRK
SIVTRSRSLSGKVPGYVPETVPEETGTEYQSHDYYTVALDQNGVPHPKLSDETEANEIIP
SLKPRRFLLSPRSLSVEGRDLPFSGHFEGEKSPREQCRLHKKDDTLSLPCVITSSGSFSQ
RSHQSSSGVSTPTSLVDIPPPFELAYITKRPVTKSSPSLLIQHESPDNLKKKKTSFKRFL
ALKFKKKSESKARGDGSVRSSRSSSESSHHGPIRVLDLDRRSTSGSPQLQSRVGKPQRNS
EIPNTFLLYKERQRRQGAPKIYSSRGIARVESFEDRSRPPFMPLPLTKPRSISFPSADTS
DYENIPAMSSDYENIQIPHGRPTRAVTITEFFDDHNRTTAPANENDGYVDMNSFAGIENK
PTTQEQDPESAYTEPFPVCPVSATVSNEEDHGRTSEEEDGCIDHCHDRQIDGRSRAYYVA
KDLVDSETEHVKALKILQEDFRAAVESAGDDEEPLLENGKLDEILSTLPQAYQLHNEILS
ELETRIKQWEDSPRVVDVILTRRAEFSSFATYISDYDRSMSVLEESCRQSKAFEDVVKQF
ETQNAEGVHVPLKHQLLRVIVRVLQYRMILTDYLNNLSPDSKEYEDTQAALVIVSEVADQ
VNDNLKHGENLLRLVHIDYSVRGKRDLLQPGRVFVKEGTLMKVSRKSRQPRHLFLMNDVM
LYTYPQQDGKYRLKNTLTLSGMKVSKPVIDNVLNTLRIEVSDVTITLSASSVGEREDWFH
TLSRAIADHAAGLNTFSCSSEAREKLWMSLGEAAPVLVPVSHVMMCMNCTSDFSLTLRRH
HCNACGKVVCRSCSRNRYPLKYLKDRMAKVCDHCYAELRKRGGNVPGSCGSASPRTNRAS
RPLSAVFQSLQPPSLWRNRKSSSPLTQVSVGAEGSTMSGSLQRRKKSKRKWKRLWFLLKD
KVLYTFKAREDKVASESLPLQGFTVKLSDRSEGEDKDNVFQLYHKKTLYYTFRADDQHTA
RRWVNAMEEATVL
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggccttgtccctccacccgaggtcctaaacctcctgtggcaccaaaaccaagg
ctagcctctgaggtaagccaaagcattgtgggcaacggggacataacatcctctgataga
ctggagctgaaccaggataatgaatcagatgtcacacaggacgaagcagacgcatccaga
gaaaactgtacagatgatgatgtggaaaatgacttgtctgacaaagagtttactgtaaat
tatgacactaaccatgacacaagttgctataatgaaatagaggaagaattacaaatggca
gtggatgaaacagtgggagacaatgaagccactgaagtacagcatgcagcctcttcagat
ttcgattcagcagatgacgaccacagcaaagacactgatgataccaagccaactgaaaat
ggagacaatgcttataacgtacttgaggacacctgtgagacactaaatgaggatcagccc
gcaggtgaatctcaaagtccatatgaggagattgaggaaccaccatcagacaatgatcag
tatgaagagaacactaaagcaggtgaggcacaagaagatgagcctggactttcttcaaag
gctacaacctgcagtcaaccctcactatgtgaggaatacccttatgatgtcattggcaca
ctggatgacaacagtacttggcaggccgaacgtgctaccaaagacccatctggacgtttc
aggttcgcagaggagacggaagatccatttgagccctactctgtcatagaggttgtacca
ggtgatttgacatgtacctctgatccagaagcaagatgcactgatgacgagtccagcaat
gagaaaccaatggattctgagatcgcaacggaggaagcatcaaaccaagagccatactat
gtatcatcagacgatgtggcagagttagaggacgaacaggcgaaattagaaaatgacgtc
tctcaacctgcttctgagggtcaggagatggcaaaaaatgaagaggttgatgactacgct
gatatcaaagacaacgatggcgatgatccgcagatagaatgtgtgtcatcggaagattac
gtcgagataggagatgaagatgagccggtaaacatggagaggaaaaccaagggcaaaagt
gtaagagaacgatcagctagaaggggacaagccctcttgagtcagaggaacagttgccag
ccacgtctcagactttgcaacattaccgttcctgctgacttggatgtaggcagaactcca
gaacttacaaaccgtgtggtttttgcccacaccacagaagcatttgaagaggacatcgaa
gagctggactgtcacattgtgcctttcttcgaggactcggacacagaaagcgacgagcac
atttatgaggaggctggcttcgactcggagggcgagaattttatctctctggacaggaag
agcattgtgacgagatctcgctcgctctctgggaaagtacctggatatgttcctgagact
gtgccggaggagacgggcactgagtaccagtctcacgactactacactgtggccttggac
cagaatggagttccacaccccaagctttcagacgaaacagaggcaaacgaaattattccc
tcgttgaagccaaggcgctttcttctttctcctcggtcgctttctgtcgagggcagagat
ttgccgttctcggggcacttcgagggtgagaaatctcctagagagcaatgcagattgcac
aaaaaggatgacacactttctttgccctgtgtgattacttcttccggaagcttttctcaa
agaagccaccagtcctccagtggcgtgtcgacacctacgtctctagttgatatcccacca
ccttttgagttagcttacataactaaaagacctgtaaccaaaagctctccatcacttcta
attcagcatgaatctcccgacaacctcaaaaagaagaagacttcatttaaacgtttcttg
gctttaaaatttaagaaaaaatccgaaagcaaagcacgtggagatggcagcgtccgttcc
tccaggtcatcatctgagtctagccaccatggacccattcgggtgctggatcttgatcga
aggagtacaagcggctccccacagcttcagtctcgtgtgggaaaaccacaacgtaactca
gaaatacctaacacttttctgctttacaaagagaggcaaagaaggcaaggtgcacccaaa
atttacagcagcaggggtatagccagggtggagtcttttgaggaccgctctcggccaccc
ttcatgcccctacccctcactaaacctcgttccatctcctttccaagtgcagatacttct
gattatgagaacattcctgcaatgagctcagactatgagaatatccagattccgcatgga
cggcccactcgggccgtcactattacagagttcttcgatgaccacaatcggacaacagca
cctgctaatgagaatgacggctatgtggacatgaatagctttgcgggaatagaaaacaaa
cccaccactcaagagcaagaccctgaaagtgcctacactgagccattccctgtttgtcct
gtgtctgccactgtgtccaatgaggaagaccatggacgcacatctgaggaagaggacggt
tgtatagaccattgccatgaccgacagattgatggccgatccagagcctactatgttgcc
aaagacctcgtggactcagaaacagaacacgtgaaggctctgaagattcttcaggaggat
ttcagggcagcagtagagtcagcaggagatgatgaggaacctctgttagaaaatggcaag
ctggatgagatcctgagcactcttcctcaggcctaccagctgcacaatgagatcctcagc
gagctggagactcgcattaaacagtgggaggacagtccgagagtggttgatgtcatatta
acgcgcagggctgagttttcatccttcgcgacctacatctcagactatgaccgcagcatg
tcagtgctggaggagagctgcagacagagtaaagctttcgaagatgtggtaaaacagttt
gagacacagaatgcagaaggagttcatgttcctctgaaacaccagctgctgcgggtcatt
gtgcgagtgctccagtaccgcatgatcctcacagactacttaaacaacctctctccggat
tcgaaagagtatgaagacacacaagctgcgctggtaatcgtgtcagaggtcgcagaccag
gttaatgacaatctaaaacacggggagaacctgcttcgcttagtgcacatcgactacagc
gtgaggggaaaaagagaccttctccaaccaggaagggtttttgtcaaggagggcactctg
atgaaggtctcacggaaaagcaggcagcccagacacctctttctgatgaatgacgtgatg
ctgtacacataccctcagcaggatggtaaatacaggctgaagaacacactgactctaagt
ggaatgaaggtcagtaaacctgtcatagacaatgtgctcaacacgctcaggatagaggtc
agcgatgttaccatcaccctttcagcaagttctgtaggtgagagagaggactggtttcac
acgctgagccgggctatagcggatcacgccgcaggccttaataccttcagctgctctagt
gaggcgagagagaaattatggatgtctctgggagaggctgctcctgttctagttcctgtg
tcacatgtgatgatgtgcatgaactgcacgtcggacttcagcctaacactgcgacggcat
cactgcaacgcttgtggaaaggttgtgtgtcgctcctgctcaaggaacaggtatcctcta
aagtacctgaaggacaggatggctaaagtctgtgaccactgctacgccgagctcagaaag
agaggtggaaatgttccaggatcatgtgggagcgccagtccgcgcacaaacagggccagc
aggcctctttctgccgtgttccagagcctacagccgcccagcctgtggaggaacagaaag
agctcctcacctctcacacaggtatctgtgggtgcagaggggtccactatgagtggcagt
ctgcaaagacgcaaaaagagcaaaaggaagtggaagaggctgtggtttctgctcaaagac
aaggtgctctacacctttaaagcacgagaggataaagtggcatcggaaagtcttccactg
cagggttttactgtgaagctgtcggatcgatcagagggggaagacaaagacaacgttttc
cagctgtaccataaaaaaacactgtattacaccttcagagcagacgaccagcatactgca
cgcaggtgggtaaatgcaatggaagaggccacggtgttatag
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