Labeo rohita (rohu): 127172937
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Entry
127172937 CDS
T09007
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00510
N-Glycan biosynthesis
lroh00513
Various types of N-glycan biosynthesis
lroh01100
Metabolic pathways
lroh04141
Protein processing in endoplasmic reticulum
Module
lroh_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
127172937 (rpn1)
00513 Various types of N-glycan biosynthesis
127172937 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127172937 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
FliD_C
Motif
Other DBs
NCBI-GeneID:
127172937
NCBI-ProteinID:
XP_050978443
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Position
11:938255..949046
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AA seq
598 aa
AA seq
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MWGAGAVSFVLVSCFFCASVSADGLVNEDVKRALDLSTHLAKITAEIQLANHGGSRVNSF
TLALEAELAPHLAFIGASVKGEEEEDESLELKETTIHGQSGKFFEAQLPSSLAPGAKLRV
KVETVFSHVLKPFPTHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVESYTKLG
NPAKSEEAIEYGPFKDVPPFSQDVMKIHYENNTPFLTISSITRTIEVSHWGNIAVEETID
LRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQVLD
DSVEVEIRPRFPLFGGWKTHYIIGYNLPSYEYLYNLGDQYALKMRLVDHVYDDQVIDELT
VKLILPEGAKNIHMDTPYPIARSQDELHYTYLDTFGRPVLVATKSNLVEQHIQDVVVHYT
FNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVASITEQVLTLVNKR
LGLYRHMDEVVNRYKQSRDTGSLNNGRKTLEAEHRTLTNDINALQTRLKAEGSDLAEKVG
EIQKLDGHLKDLVCRSCQEAERLVAGKVKKDAYIESDKTLTGKRQELVSRIDSLLDAL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgccggagcggtgagttttgtgttagtctcgtgttttttctgcgcgtcggtg
agcgcggacgggctcgtgaatgaggatgtgaagcgcgcgctggatctgagcactcacctc
gccaagatcacagccgagattcagctcgcgaatcacggaggctcgcgggtgaacagcttc
acgctcgcgctggaagcagagctcgcgccgcacctcgccttcatcggtgcatctgttaag
ggggaggaagaggaggatgaaagcctggagctgaaggagacgactatccatggacaaagt
ggtaaattcttcgaggcacagttaccgtcttctctcgctccgggcgctaaactgcgggtg
aaggttgagacggtgttcagtcacgtgctgaagcctttccccacccacatcacccaggcc
gagcgtcagctggtggtcttccaggggaaccactacctgtactccccgtaccccacacgc
tcccagaccacacgcgttcgcctggcctccaaaaccgtggagagctacaccaagctgggc
aaccccgccaagagcgaagaggccatagagtacggacccttcaaagatgttcctcccttc
agccaggatgtcatgaagatccactatgagaacaacacccccttcctcaccatcagcagc
atcactcgcaccatcgaggtctctcactggggcaacatcgccgtggaggaaaccatcgac
ctgagacacaccggcgcttacctgaagggtcctttctcccgctatgactaccagagacag
tctgatagcggcatttcctcagtcaaatctttcaagaccatcctcccagcctccgctcag
gatgtgtattaccgcgatgagatcgggaacatctccacctctcacctccaagttctagat
gattccgttgaggttgaaatccgtccccgtttcccgctgtttggtggctggaaaacacat
tacatcattggttataatcttcccagctacgaatacctctacaacctgggagatcagtat
gccctcaagatgcgtctggtcgatcacgtctatgatgaccaggtcattgacgagctgact
gtgaaactgatcctgcctgagggagccaagaatatccacatggacactccctaccccatc
gcccgcagtcaggacgagctgcattacacttacctggacacctttggcagacctgtgctg
gtggccaccaagagcaatctggtggagcagcacattcaggatgttgtggttcactacacc
ttcaataagatcctgatgctgcaggagcctttgttagtggtgggagcgttctacatcctc
tttttcaccgtcatcatctacgtgcgcctcgacttctccatcaccaaggatccagcggca
gaggtgcgcatgaaggtggcctccatcaccgagcaggtgttgactctggtgaacaagcgt
ctgggtctgtaccgccacatggatgaagtcgtgaaccgctacaagcagtctcgcgatacg
ggatcgctgaacaacggccgtaagaccctggaggccgagcaccgcaccctcaccaatgac
atcaacgctttacaaacccgcctcaaagcggagggctccgatctggccgaaaaggtcggc
gagatacagaagttggacggccatctgaaggatctggtgtgccggtcctgtcaggaggcc
gagcggctggtggccggaaaggtgaagaaggacgcctacatcgaatcggataaaaccctg
acgggcaagaggcaagagctggtcagccgcatcgacagccttctggacgccttgtaa
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