Labeo rohita (rohu): 127172980
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Entry
127172980 CDS
T09007
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
lroh03083
Polycomb repressive complex
lroh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127172980 (rbb4l)
03083 Polycomb repressive complex
127172980 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127172980 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172980 (rbb4l)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127172980 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
127172980 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
127172980 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127172980 (rbb4l)
PRC2.2
127172980 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127172980 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127172980 (rbb4l)
Chromatin remodeling factors
NuRD complex
127172980 (rbb4l)
NuRF complex
127172980 (rbb4l)
NuRF complex (fruit fly)
127172980 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127172980
NCBI-ProteinID:
XP_050978515
LinkDB
All DBs
Position
11:complement(8658782..8667777)
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagaagtgtatgatgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccattcctgtacgatctagtcatgacacatgcactcgag
tggccgagtttgacggtgcagtggcttcctgatgtaaacaggcctgagggaaaggactac
gtggttcatcggctggtgctgggcacacacacttcagatgagcagaaccacttggttatc
gccagtgttcagatccctaatgatgatgctcagtttgacgcgtcccactacgacagtgag
aaaggagcagagtttggagggtttggatcggtgagcggaaagatcgagattgaaattaag
atcaaccatgaaggagaagtgaacagggccagatacatgccacaaaacccctgcatcatc
gccaccaagaccccgacttctgacgtgctggtgtttgattacaccaaacatccatccaag
cctgaccccagtggagagtgtagtccagacctgagactgcgggggcatcagaaggaggga
tacggtttgtcctggaaccccaacctgagtggaaacttactcagtgcatcagacgaccat
acgatctgtctgtgggacatcagtgctgttccaaaggaggggaagatagtagatgccaag
actattttcacagggcacacagctgtggtggaggatgtgtcctggcaccttctacatgaa
tcgctattcggctctgtggctgatgaccagaaactcatgatctgggacacacggtccaat
aacaccgcaaagcccagtcactctgtggacgcccacacagctgaagtcaactgcctgtcc
ttcaacccttacagcgagttcattctggccactggctctgcagacaagactgttgcattg
tgggatctgcgtaacctgaagctgaagcttcactcttttgagtcacacaaggatgaaatc
ttccaggtccagtggtctccccataacgagaccattctggcctccagtggcacggataga
cgcctcaatgtttgggatctgagtaaaatcggagaagagcagtcagcagaggatgcagag
gatgggccaccggagctgctgttcattcatggtggccacacagcgaagatctctgatttc
tcctggaacccaaatgaaccttgggtaatctgttctgtgtcagaggacaacattatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccggacacccctgcgtcagag
ctggaggggcaggcgtcataa
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