Labeo rohita (rohu): 127172981
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Entry
127172981 CDS
T09007
Symbol
acap3b
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3b
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127172981 (acap3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127172981 (acap3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127172981 (acap3b)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127172981 (acap3b)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127172981 (acap3b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127172981 (acap3b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_5
Ank_4
Ank_3
PH_21
TPR_TTI1_N
ANK_LRRK2
PH_11
PH_8
BAR_2
Motif
Other DBs
NCBI-GeneID:
127172981
NCBI-ProteinID:
XP_050978517
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All DBs
Position
11:1215012..1295285
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AA seq
862 aa
AA seq
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MTVDFEECIKDSPRFRANIDEVETDVVEIEAKLDKLVKLCSGMIEAGRAYVTANKLFVNG
IRDLSHHCKKEEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKQFDKVREDMEIAQVKNAQAPRNKPHEVEEATSALITTRKCFRHLALDYVLQINVLQA
KKKFEILDSMLSFMQAQYSLFQQGFNLLDEIDPYMKKLAAELDQLVIDSAVEKREMEHKH
ATIQQRTLMQDFAYDDSKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKRLKDALTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYREISENYYIERLDRTASPSTSSIDSASEPRERVVRGESILQRVQSLPGNEICCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDTWEPELMKLMCELGNTVIN
QIYEGACEEQGLKKPGPSSSRQDKEAWIKAKYVERKFLKKMCGSEAVVEGSRKSHHWSVK
KCRRHNSSIRAPKTRRKYRHDAAIMSPANLSAAAAAAKFRRESLFCPDELDSLFSYFDTG
SGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEDSDESSGEVDIEQEASDPE
DARELDPNALLHKASRARSLAVMAEALAHGADVNSVSEEDESKSPLIQAVAGGSLIACEF
LLQNGADVNQKDVRRRAPLHHATCLGHTGQVCLFLKRGASQMEVDENGQDPLSIAVQAAN
ADIVTLLRLARMNEEMREADGPFGQPEPSIPVSPVRVKRKSSRTSPRVLSPFGSFRSWLY
TPPKHQPAVPLKVDALGDSSKT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaggaatgtattaaagattcaccccgattcagggcgaatattgat
gaagttgagacggatgttgtggaaatagaagctaagcttgataagttggtgaagttatgc
agtggtatgatcgaagctggtcgtgcgtacgtcactgccaataaactcttcgtcaatggc
attcgagacttgtctcaccactgcaaaaaggaggagatgatctcagaatgtcttgaaaag
tgtggagagagccttcaggaaatcgtcaactatcacatgatccttttcgaccaggcccag
agatccgtaaagcaacagttgcacaatttcgtgaaagaggatgttcggaagtttaaagag
acgaagaagcagtttgataaggtgcgggaggatatggagatcgcccaggtgaagaacgca
caggcgcctcgcaacaaaccgcacgaggtggaggaggcaaccagcgccctcattacgacc
cggaagtgcttccgacacctcgccctagactacgtgttacagatcaatgttcttcaagcc
aaaaagaaatttgaaattttggattcgatgctgtcgttcatgcaggctcagtacagtctc
ttccagcagggcttcaacctcttggatgagatcgacccctacatgaagaagttggctgct
gagttggatcagctggtcatagattcagcggtggagaaaagagagatggagcacaaacat
gccaccatacagcaaagaactttaatgcaggattttgcatacgatgactccaaagtggaa
ttcaatgttgatgctcctaatggtgtggtgatggagggatacctcttcaagagggcgagc
aatgctttcaagacatggaacaggcgatggttttcaatacagaacagtcagttggtctat
cagaagcgactaaaagacgctttgactgtggttgtggaggacctgcggctttgctcggtg
aaaccttgtgaggacattgagagacggttctgttttgaagtggtgtcacctacaaagagc
tgtatgctgcaggctgaatctgagaagctccgtcaagcttggatccaagcagttcaggcg
agcattgcttccgcctacagggaaatttctgaaaactattacattgagcgtttggacagg
acggcgtctccctccacgagcagcatcgactctgccagcgagccgcgggagcgtgttgtc
aggggagagagcatcctgcagcgcgtccagtctctgccgggaaacgagatctgctgcgac
tgcggtcaggccgaccctcgctgggccagcatcaacctcggcattctgctgtgcatcgag
tgctccggcattcacaggagtttgggcgtccactgctctaaagttcgctctttaacactc
gacacgtgggagccagagctcatgaagttgatgtgtgagcttggcaacactgtaatcaac
cagatttatgaaggtgcgtgtgaggaacagggacttaagaaacctggtcccagcagctca
aggcaggacaaggaagcgtggatcaaagcgaagtatgtggagaggaagtttctgaagaag
atgtgtggctccgaggctgtggtggaggggagcagaaaatcacatcactggagcgtgaag
aaatgcaggagacacaacagctccatcagagcccctaaaacccgccggaaatacaggcac
gacgctgccatcatgtcgccggccaatctctccgctgctgcagcagctgcaaagtttcgg
agagagtccttgttctgtcctgacgagctcgactcgctcttctcttacttcgacacgggc
tcagggcctcgcagccccgcaggtctcagcagcgatagcgggcttggcggcagcaccgac
ggcagcacggacatactcgttttcggctcggtggtggacagcgtcactgaggaagagtgt
gaggactccgacgagtcgagcggggaggtggatatcgagcaggaagcgtctgatccagag
gacgcacgggagcttgacccaaatgcgctgcttcataaggcgtcccgggccaggagccta
gcggtgatggcagaggcgctcgcacacggtgcagatgtcaactctgttagtgaggaggac
gaaagcaagagtccgttaatacaagcagtcgcagggggttctctgatagcctgtgagttc
ctgctgcagaacggagcagatgtcaatcagaaggacgtacgaagacgagcacctctgcac
cacgccacgtgcctgggtcacacgggacaggtgtgtttgttcctgaagcgaggagcctct
cagatggaggtggatgagaacgggcaggaccctctcagtatcgccgttcaggcagccaac
gcagacatcgtcacattattgcggttagcccggatgaacgaggagatgcgagaagcggac
gggcccttcggacagccagagcccagtatacctgtgagtccagtgagggtaaagcgcaag
agttcacgaacgtctccacgtgtgctgtcacctttcgggagtttccgctcatggctttac
acacctccaaaacaccaaccagctgtcccgcttaaagtggacgccctcggagactctagc
aagacatga
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