Labeo rohita (rohu): 127173094
Help
Entry
127173094 CDS
T09007
Symbol
slc1a8a
Name
(RefSeq) LOW QUALITY PROTEIN: excitatory amino acid transporter 5
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127173094 (slc1a8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127173094 (slc1a8a)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
127173094 (slc1a8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
DUF373
Motif
Other DBs
NCBI-GeneID:
127173094
NCBI-ProteinID:
XP_050978688
LinkDB
All DBs
Position
11:7461050..7474167
Genome browser
AA seq
599 aa
AA seq
DB search
MHDGLIPCXKKLRFALLRYSQRLAMEELLIPADTEEAPPEPAIIFSPAGPAKTPLERMKN
FMASTFSVSVREYVKDYIRQNGLLTLSVLAVITGCILGFMLRGLELSTQAKIYFSFPGEL
LMRILKMLILPLITSSLMSGLSSMESKACCRMGVLTVTYYLWTTFIAVVVGIVLVLIIKP
GYGTHMESSRLGGGQVITSADALLDLVRNMIPSNLIEATFQQYKTDIIPVLKTPVNTGRP
NFVYLMPDEENPKGRTVLLELTPPPDIDYKTRPSSSQQMNVLGIVIFSATMGLLLGKMGE
RGAPLVSVCQCINECVMKIINAAVWYFPFGIIFLVAGKILDMSDPSTLGKKLGWYGVTVM
AGLFVHGLILLPFFYFILTRKNPFTYIRGLLQAMVIALATSSSSATLPITMKCLLENCRV
DRQIARFVLPVGATINMDGTALYEAVAAIFIAQVNEYELDFGQLVTISITATAASIGAAG
IPQAGLVTMVIVLTSVGLPADDITLIVAIDWILDRFRTMINVLGDALAAGIIGHLCRKDF
PPDRAAKAYGASQESQTAQNMENVPLTEVPLLAGKDCIFEVVGDTVFERPTVYYNICQV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatggcttaatcccttgttagaaaaagttacgctttgccctcctgcgttactcg
cagcgtctcgccatggaggagctactgatacccgcagataccgaagaggcgccgcccgag
cctgctatcatcttctctccagcgggaccggctaaaaccccactggagaggatgaagaac
ttcatggcaagcacgttctcggtcagcgtcagagagtatgtaaaggactacatcaggcaa
aacgggctgctgacgctctcggttctagccgtgatcacaggatgcattctgggcttcatg
ctgagaggtctggagctctccacacaggcaaaaatctatttctccttccctggtgagctg
ctcatgcggatacttaaaatgttgattcttcccctaatcacctccagtttaatgtctgga
ctgtcatctatggagtcaaaggcctgctgcaggatgggggtgctgacagtcacttactac
ctttggaccacgttcattgcagtagtggtcggcattgtactcgttcttatcatcaaacct
ggctatgggacacacatggagagcagtagactgggaggtggacaagtaataacatctgca
gatgcgctgctggatctggtcaggaatatgatcccctccaatctcattgaagccacattt
cagcagtataaaacagacatcattccagtcttaaaaacaccagtgaacacaggacgccca
aattttgtctacttgatgcctgatgaagaaaatccaaagggtcggacggtgctgttggag
ctaacgccacctccagacatcgactataagacccgtccaagcagcagtcagcagatgaac
gtactcggcattgttattttctcagccacgatgggtctcttacttggtaaaatgggtgaa
cggggagctcctctggtcagcgtttgccagtgcatcaatgagtgtgtgatgaagattatt
aatgcggccgtatggtattttccttttgggatcatcttccttgtggctggcaaaatcctg
gatatgagtgatccctccacacttgggaagaagctgggctggtacggggtaacggtcatg
gcaggcctgtttgtgcacggcctcatcttgcttccattcttctatttcattctgacacgg
aaaaatcctttcacatacatcagagggcttctgcaagccatggtcatcgccctcgccaca
tcatccagttctgcaacgctgcccattacaatgaaatgtttgctggagaactgccgagtg
gacaggcagattgcccggtttgtgctgccagtgggagccaccattaacatggatggaacg
gcgctttatgaagcagtcgctgctattttcattgcccaagtcaacgagtacgaactggat
ttcggacagttggtcaccatcagtataacagcgaccgccgccagcataggtgccgctgga
atccctcaggcaggccttgtaaccatggtgatagtgctgacatctgttggattgcctgca
gatgacatcacactgattgtggccattgattggatcttagatcgctttcgaacaatgatc
aatgtactaggagatgctctggcagctggaatcattggccacttgtgtcgaaaagacttc
ccacctgacagagcggctaaagcatatggagcttcacaggagagccagacggctcaaaac
atggagaatgtgcctttaactgaagtaccactgctggccggcaaagactgtatatttgag
gtggtcggggacactgttttcgaaagacctacagtctactacaatatatgtcaggtctga
DBGET
integrated database retrieval system
