Labeo rohita (rohu): 127173098
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Entry
127173098 CDS
T09007
Symbol
atxn7l2a
Name
(RefSeq) ataxin-7-like protein 2a isoform X1
KO
K11318
ataxin-7
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127173098 (atxn7l2a)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127173098 (atxn7l2a)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127173098 (atxn7l2a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127173098 (atxn7l2a)
SAGA complex
127173098 (atxn7l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
TDBD
FG-GAP_2
TPR_Epg5_C
OrsD
Motif
Other DBs
NCBI-GeneID:
127173098
NCBI-ProteinID:
XP_050978693
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Position
11:complement(18113656..18125331)
Genome browser
AA seq
753 aa
AA seq
DB search
MMAVRERAVKVMAALERRVPCLDDFLGQSWSVWTERANLTASEGSDGDEFSKNGKKTTET
MTLRKEGCDDDHWSCCFFQLCQNMSIFGHYPGHDDFYLVVCGHCSQVVKPQAFEKHCERR
HGPLGKLYAHLRSTPPPPQQQRPRHGHTPPSHGASSWSGRNQNVGPPRASPQSPSTPPQF
RHSKPPKDGVWHSPSNSGHSESAVFKQPPPIEPTRSSPPPTHRDPPWPHGGPSPNRPSST
ERPQSQRGEAASAPVASGHLRGPRTYKMVSKKECDLDKHCGVLDPERKKVCTRLLTCNIH
SIHQRRKVQGRSKNFDQLVAELKMSSKARDRVSQAPESSAAPTVSPEPPRDAPAPPVCRR
PLTNSPAFRTPTLSESVEEDKPHVEDGSTRPHSPLTQAHISGDESEGEGNDDLADWHSTP
WHPKPAALCSFGSHSLGHGVFTFDRRLHHLRSAMSAMVENHLSAHLWKKIPQASDPHSQS
PPAKPAAVPASPSSISQHSKQKAGSHNSTSLKTSFYSSHGPGKEPNPQSSSTSKAYGQSE
NSGGGQSTAPPSKLGRAPAQSGPGRPKNSSGRPNKQQLRLREAERTTTPDAAALRKRKAS
FEESDSVSPDKNCVSQNKGRPLISKTPPSASHGQTNGSLSPGSKPRPQLAPSDSHTPSSW
AFKRTHPPTHHSPPDTAPHSRGVDSGLHGRVASFDHKGLGKKRKSSGSSPPSKPHRLPTS
PHSGFYPWKESKGAGLSIGGEKKLSTQKPKLHH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggtgcgtgaacgcgcagttaaagtaatggctgctctggaacggcgggtgcct
tgtctcgatgattttttgggccaaagctggagcgtctggacggaaagagccaacctgaca
gcatcggaggggtccgatggagacgaattcagcaagaatggcaaaaaaacgacggaaacc
atgacactgaggaaagaggggtgtgatgatgatcactggagttgctgttttttccagtta
tgccaaaatatgtccatctttggtcattatcctgggcacgatgatttctatctggtggtt
tgcggccactgcagtcaggtggtaaagcctcaggcgtttgagaagcattgcgagaggagg
cacggccctctgggtaagctctatgcacacctccgctccaccccacctccacctcagcag
cagagaccccgtcatggacacactccgccctcccacggagcatcctcttggagtggcagg
aaccagaatgttggtccaccgcgggcgtctccgcaatctccctcaacgccacctcagttc
agacactcgaaacctccgaaagatggagtttggcactcaccttcaaactcgggtcattca
gaatcagctgtttttaagcagccccctcccatcgaacccacgcggagctcccctccccct
actcacagagaccccccatggccacatggaggcccttcgcccaatcggccttcctcaact
gaaaggcctcaatcccagagaggcgaggctgcctcggcccctgtcgcctccggacatctc
cgtgggccaaggacgtacaaaatggtttccaaaaaagaatgtgaccttgacaagcattgt
ggtgtgttggaccctgagagaaagaaagtttgtactcgacttttgacctgcaatattcat
tccattcatcagcgcaggaaggtgcaaggcaggagtaaaaactttgaccagctggtggct
gagctgaagatgagttcgaaggctcgtgatcgggtatctcaggccccagagagttcagct
gctccgactgtaagcccagaacctcccagagatgcacccgcaccccctgtctgccggaga
cctctgacgaacagccctgcgtttagaacacccacattgtctgaaagtgtggaggaggac
aaaccccacgtagaggatggcagcacacggccacactctcctctcacccaggcccacatc
tcaggtgatgagagcgaaggagaggggaacgacgacctcgcagactggcattcaactcca
tggcatcccaaaccagctgcgctttgttcatttgggagtcattctctgggtcacggtgtc
ttcactttcgatcgacgattgcatcacctacggtctgctatgagtgccatggtggagaac
cacctcagtgcccatctgtggaaaaaaatacctcaagcatcagatcctcactcccagagt
cccccagccaagcctgcagccgttcctgcctctccttcctccatttcccagcattccaaa
cagaaagcaggaagtcacaactcgacttctctcaagacttccttctactcttcccacgga
ccaggcaaggagccaaacccgcagagttcctccaccagcaaggcttacggtcagtccgag
aactctgggggcggccagtccacggctcccccttctaaactcggtcgagctcctgcgcag
tcgggtcccggtcggcccaagaactcgagcggccgccccaacaaacagcagctgcgtctc
agggaagcagagcggacgaccacaccggacgccgctgcactgcgcaaacggaaagcatct
ttcgaagagtcagactctgtcagcccggacaagaattgcgtgtctcagaacaaggggcgg
cccctcatcagtaaaacgccaccgtcagcctctcacggacaaaccaacggctcgctttcc
cccggaagcaagccgcgtccccagctcgcaccctctgattcccacacgccatcctcgtgg
gcctttaagaggactcaccccccgacccaccattcgcccccggacactgccccgcacagc
cgaggagtggactcaggactgcatggcagggtggccagctttgatcataagggtttgggg
aagaaacgcaagagcagcggctcctctccaccctcgaaaccccaccggctgcccacttcc
cctcattccggtttctatccctggaaagaaagcaaaggggcgggactctctataggaggg
gaaaagaaactcagcacacaaaagccaaaattgcaccactga
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