Labeo rohita (rohu): 127173125
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Entry
127173125 CDS
T09007
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127173125 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127173125 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127173125 (csf1a)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
CSF and other factors
127173125 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
EC042_2821
CbtA
ArsP_2
Motif
Other DBs
NCBI-GeneID:
127173125
NCBI-ProteinID:
XP_050978744
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All DBs
Position
11:complement(26938336..26957775)
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AA seq
537 aa
AA seq
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MNTHITAHKAKVRHLCFFLILCFHLVYAGVPGPCKHSVTQDHLLNLRRLIKNQLQNGCSI
TYTFTERQNLSAVCYVKAAFPHILELLNTQFRYAKDSDNYRYTNSLKNLIYNIYSQRCIP
PINDEIEDSPVKFVRTHVTLPRAALEKAGEVIRMYMGLMTQSNKPVDWNCEEEYTEDYPE
STTEPLSQTAGASECPCICPTMSIGSSKTSASTSHWNIYLKSTPSPKRSSFSPVVTLQGG
NERTKQIKSAVPLTKNQALALGSPATWRSTQGDLSNFLFGSTPAVDEETSNSEMDHMLSL
DHFPSFTNLQDVFPSRTGFGPYQKGTSESTQGGVEKSTPLLLAKRSLDSKSQEAPSSSDV
KLPQNWVTSTSEPTNKDIKSSEIKDKPFQKLQLSKHFVPVTTAVLPSLKAAAHLSEGLNA
LVELPGHLNSPPENLQTHTQNPTRVPRNFMRTIHEAKLSKDSRYQEDRQETKGQTHQYKE
TEMNSSTEQSSSTIITFGTVLLITLGCGGLLLVTVLFYRQQRVSDSQFILALLKRPT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccaaggtaaggcatctgtgcttcttccttatc
ctgtgctttcatttggtgtatgctggtgtgccaggtccatgtaagcactctgtcacccag
gaccatctcttgaatttaagacgtctgattaagaaccagctgcaaaatggttgttcaata
acctacaccttcactgagcgccagaacctgagtgctgtgtgttatgttaaagcagcattc
cctcacatactggagctactcaacactcaattcagatatgctaaagactcggacaattac
cgttacactaattcactgaagaacttgatctacaacatttattcccagagatgcatccct
ccaatcaatgacgagattgaggatagcccagtgaagttcgtaagaacccacgtgactttg
cccagggcagctttggagaaagccggggaagtgattcgcatgtatatgggtctgatgact
cagagcaacaagcctgtggactggaactgtgaggaggagtacacagaagattacccagaa
tccaccactgaacctctcagccaaactgcaggtgcctccgaatgcccctgcatttgtcca
accatgagcattggatcatctaagacctctgcatccacaagccattggaatatttacctg
aaatctactccatccccaaaaagatcttccttttcacctgtggtaaccttacagggtggt
aatgagagaactaaacaaatcaaatccgctgtcccattaaccaaaaaccaagcactagct
ctagggtcgcctgccacatggaggtcaacgcaaggagatttatccaacttcctctttggt
agcactccagctgttgatgaggaaacttcaaattcagagatggaccatatgctatcactg
gatcatttcccttcatttacaaatcttcaggatgtatttccaagcagaactggctttggc
ccctatcagaaaggcacaagcgaaagcacacagggcggtgtggagaagagcacgccgctt
ttacttgccaagaggtctttagattccaaaagccaagaagcaccatccagttccgacgtg
aaattaccacagaactgggttacctcaacgtctgagccaactaataaagatataaagagc
tcagagataaaagacaagcctttccaaaaacttcaactgagtaaacactttgtaccagtc
acaactgcagttctgccttctttgaaagcagctgctcatttgtcagaaggtctgaatgcc
cttgttgaactgccaggtcatttaaacagccctcctgaaaatttgcaaacacacacccaa
aatccgacaagggtgccaaggaatttcatgagaaccatccatgaggcgaagctcagcaaa
gacagcagataccaggaggacaggcaggagacaaagggccagacacatcaatacaaagaa
acagagatgaactcttccacagaacaatccagcagtacaatcatcacttttggtaccgtg
ctcttaattacattagggtgtggtggacttctgctcgtaactgtcctgttttacagacag
caaagagtaagtgactcacaattcattcttgctctactgaaaagacccacttag
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