Labeo rohita (rohu): 127173189
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Entry
127173189 CDS
T09007
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127173189 (trappc10)
Membrane trafficking [BR:
lroh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
127173189 (trappc10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
Motif
Other DBs
NCBI-GeneID:
127173189
NCBI-ProteinID:
XP_050978844
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All DBs
Position
11:12678343..12702683
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AA seq
1259 aa
AA seq
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METHEEKPIIYTMENKPIVTCAGDQNLFTALYGSLTQQLPREPMEWRRSYGRAPKMIYLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEVYKASVKEDMQRWQAVLRLHGSVD
WLIVVVESDNKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVSLSDPLKESSRSQESWSSF
LTKLRTLLLMSFTRNLGRFEDEMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCQPVRSWNGLLLRRPIDMEKRDLIQKGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTARALELLHNCVQELRLLEVSVVSGALDCWVFLSC
LEVLHRIEGCCDRTQLEANSSHTVGLWTYATEKLKCLGDLCGLVSENGPNSEDLNKTVDL
LAGLGAERPETANSPQSPYKKLKEALSSVEAFEKHYLELSHAAMEMYKAIGRLRSARLVG
KSLAEFYMRKGDPQSAEDFLLDSLKSYVSESWSLPLTHTRKQIAECQKQLQKMDEYLQTS
ALLASDTNLSDEERKHFCQEILTFASQTTEGKGQQKDGRVALSMSSFTQLQELRFRPASA
LVHVGAVLQLELRVCSLMPIPVRAEQLAASIHFTQEQPGTTAQKRAAQNPDGTVTFPAAS
PVAASPALELCEIQEHSPSDNALSSAGVACKNMHLLMRRHDSAASLDTPNAAPSAVAMED
GAQMLKASDVTLSPGNNSIVFTAPSQKPGTYTLRQLCATVGRVQFVLPHLYPVVQYEVYS
QEPQLSIQPLTENLLAGLPQQVKFTILTGHYAVKKGDALQLSNTDSMPVLHSSTCGARIL
SSSAELLGESALSIQSSEKVTSISLPVTPPYHTLEFLLDVLCHIPSSPARMESERLTNGQ
ISHRARSRTRFSSGMAVIDQKVSVDCPWSIYSTLVSLTFHVPFKVKHSLLSAGRRKFIQV
CLQNVSDTNFRLTNQTLTENQHTPSLELLSLNTKTHSEVFSHQCVFSVWEVRWSGAPPVS
LHCEFSAAFAPSDAPDAALKPYRYEFTLERVSTLYSVRAEIRPAAGEQHCRTGALCRLEV
SLTRLTEPSDTERSDEEFSDTDGLRTTRLMYEVIDNNSNWAVCGKSSGVVSMPVAAMATH
KVHMEVMPLFAGHLPFPNIRVFKYLPHHASPVIQPDTDSCLENDSLSLLDKTLEDQADTA
SLRSRGSVQSLGSGESAQPRGPMPKRQAFGPGQVFNGTQGRQVLVLPAADHHVMEVNVT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggagacccatgaggagaagcccatcatctacacgatggagaacaaacccatagtgacc
tgtgcgggcgatcagaacctgttcacggccctgtacggatcactgacccagcagctgccc
cgagagcccatggagtggaggaggtcttatggacgagcaccaaagatgatctatctggag
gctaattttgtccagttcaaggaggaactgcttcctaaagagggaaataaagcgctgctg
acgttccccttcctgcacatctactggaccgactgctgcgacacggaggtgtacaaggcg
tctgtgaaggaggacatgcagcgctggcaggccgtcctgcgtctccacggctcggtggat
tggctcatcgtggtggtggagagcgacaacaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtggacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtgtctctgtctgacccgctgaaggagtcgtcgcgctcgcaggagtcgtggagctcgttc
ctcacgaagctgcgcacgctgctgctcatgtccttcaccaggaatctgggccgcttcgag
gacgagatgaggacgctgcgagagaaacgcaccgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagctggcctttgtgttcgagatgctgcagcagtttgaagacgct
ctggtccagtatgatgaactagacgctctcttcacacagtatgtgctcaacttcggcgcc
ggagacggcgctaactggctgggctcgttctgtcagccggtgcggagctggaacggactg
ctgctgcggcggcccatcgacatggagaagcgtgatctgatccagaaaggagaggccagt
ctgctggatctgcgcagctacctgttctcccgccagtgcacgctgctcatcttcctgcag
agaccctgggaggtgacggcccgcgcgctcgagctgctgcacaactgcgtgcaagagctg
cggctgctggaggtgtctgtggtgagcggcgctctggactgctgggtgtttctcagttgt
ctggaagtcctgcaccggatcgagggctgctgcgaccgcacccaactggaggcaaactcc
tcccacaccgtgggtctgtggacctacgccactgagaagctgaagtgtctgggtgatctg
tgcggtctggtgtctgagaacggccccaactctgaggacctgaacaaaaccgtcgacctg
ctggctggtctgggagcagagagacctgaaacggcgaacagtcctcagagtccgtataag
aagctgaaggaggccttatcgtctgtggaggcctttgagaaacactatctggagctgtct
cacgccgctatggagatgtacaaggcgatcgggcggctgcgttcggctcggctggtcggg
aagagtctggctgagttctacatgaggaagggtgaccctcagagcgctgaggacttcttg
ctggattctctgaagtcgtacgtgtctgagagctggagtttaccgctcacgcacacgcgc
aaacagatcgcggagtgtcagaaacagctgcagaagatggacgaatacctgcagacaagc
gctctcctcgccagcgacaccaacctgagcgatgaagagaggaaacacttctgccaggag
attctgacctttgccagccagaccacagagggcaaaggtcaacagaaagacgggcgtgtg
gctctgagcatgagttcgttcactcagctgcaggagctgcgtttccgtccggcgtctgcg
ctggtgcacgtgggcgccgtcctgcagctggagctgcgcgtctgcagtctgatgcccatc
cccgtgcgggcggagcagctcgccgccagcatacacttcacgcaggagcagccgggcacc
acggcccagaaacgagccgctcagaacccggacggcaccgtcaccttccccgcggccagt
ccggtggcggcgtctccggcgctggagctctgcgagatccaggaacacagtccgtccgac
aacgcgctcagctccgccggcgtggcctgcaagaacatgcacctgctgatgcgtcgccac
gacagcgccgcctcactggacacgcccaacgccgcgccctctgccgtcgctatggaggac
ggagcgcagatgctgaaggccagtgatgtcactctgtcgcctggcaacaacagcatcgtc
ttcaccgcaccaagtcagaagccgggcacgtatactctccggcagctgtgtgccacggtg
gggcgcgtgcagttcgttctgccccatctctaccctgtggttcagtatgaggtttactcc
caggagcctcagctcagcatccagccgctcacagagaatctgttggcgggtttaccgcag
caggtgaagttcaccatcctgacgggtcactacgccgtgaagaagggcgacgctcttcag
ctcagtaacaccgactccatgcccgtgttgcactcgtccacgtgcggcgcccgcatcctc
agcagcagcgcagagctgctgggtgaaagcgctctgtccatccagtcgtccgagaaggtg
acgagcatctctcttcctgtgacgccgccgtatcacacgctggagttcctgctggacgtg
ctgtgccatatcccgtcatcccccgcgcggatggagagcgagcgcctcactaacggacag
atcagccaccgcgcgcgcagccgaacgcgcttcagcagcggcatggccgtcatcgaccag
aaggtgtctgttgactgtccctggtccatttactccacactggtctctctgaccttccac
gtgccctttaaagtcaaacactcactgctgtctgcaggacggaggaagttcatccaggtt
tgccttcagaatgtatcggacactaactttcgtctgaccaatcagacgctgactgagaat
caacacacgccgtcactggagctgctctctctcaacactaaaacacacagcgaggtgttc
agtcatcagtgtgtgttcagcgtgtgggaggtgcggtggagcggtgcgccgcccgtctct
ctgcactgcgagttctcggccgctttcgctccttcagacgctccggacgcggcgctcaaa
ccctacagatacgaattcacgctggagcgcgtttcaacgctgtacagcgtgcgagcggag
atccgtccggccgcgggagagcagcactgccgcaccggcgccctctgcaggctggaggtg
tcgctcacgcgcctcaccgaacccagcgacacggagcgctccgacgaggagttcagcgac
accgacggcctgcgcaccaccagactcatgtatgaagtgattgacaacaacagtaactgg
gcggtgtgcggcaagagttcaggggtcgtttccatgccggtggctgccatggcgacgcac
aaagttcacatggaggtcatgccgctgtttgcgggtcacctgccctttcctaacatacgt
gtgttcaagtacctgccgcaccacgccagccccgtcatccaacccgacacagactcgtgt
ctggagaacgacagcctgtctctgctggacaagactctggaggatcaggcggacacggcg
agtctgcgcagccgcggcagcgttcagtctctgggcagcggcgagtctgcgcagccgcgc
ggccccatgcccaaacgccaggccttcggtccgggtcaggtgttcaacggcacacaggga
cggcaggtgttagtgctgcccgccgccgaccatcacgtgatggaggtcaacgtcacatga
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