Labeo rohita (rohu): 127173192
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Entry
127173192 CDS
T09007
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127173192 (ap5b1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
127173192 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
127173192
NCBI-ProteinID:
XP_050978851
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All DBs
Position
11:16460886..16465172
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AA seq
934 aa
AA seq
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MTIADTWDQRISAFLLSPSQFLATTTSESFLAEVLHELRNDKANDQLKILLVSMLLEHPT
ILCPSSTVGEETALELLSVFSHTPQKSIILKCNVMLAITNVIICTSCLATHTKMAEDWLD
LLFQTIQDTNDYRCGVSQQPLRATACDCLREMETCNPGLLSQKLEALYLLKQQETTVLHQ
SYCMLYTLGLKNAIKILANQKDVTDLEFKSILGGNEGFAWKTNQLGLTSLPINMMVQVPH
LPPGLDCKELKSIMSSLLEESYLLTPISQSALLRELVEVVAMVPGLSPTLFKSQLLRLFG
TADVSLMHATLFMKDTFTDSLFTGEDENFLLKRLVSTAQHPLLRIPEKLFYMECILHFPE
NRPISSCGEESLPVLVTPRLAASLHPTVFNDSATMLCRLNLLCLVHLEADEGEADKGIDY
LFDHIMALLKIVDNDSSREVVVTSFRALFIFLMHFNGIEQLPEKLIERLCDMYSRHSRLA
PNLIGLADRIQEHLDDPVWSVKLLRGLQKCIMEMPPLQLTIHNLSWHLKVLRRVAKEGQI
TQKNTIYLLLNVLINSNLCERGNWQVGNAVLAVCRNLLEHPSIDQTFIELADLLQYISVH
YDDTDIKDHARFYYTLLTNLSWEKLTGVLVKGLNGGRTKERSHSAIMAESEGIASNLTVH
KTNRHVLQLIKVHEKAFQSSLESSEPLETMEEARNWMEVYQGQFQTPGFGSEVILRYNLT
HAKESDPLFNEVFTICLHFELRDSNYAKVNDIHVPCVFKDRKPPAVKVKLKPFQPYPTTL
RLSAIFTTRDGRSWHSQLPDVSVSFPEIFLPLPLPPNTPCECKEQVFDSIWEAAASGNPD
KSATSLFCFKTGDESLTTLIETHFQGYLITDQPIERSWKVLFFLPPMCHVLLKITQAEDA
VQVSIATDNWELLPFVNSYLQNITDHCSATVKDG
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcggatacttgggatcaaagaatatctgcctttctgctgagtccatctcag
tttttggccaccaccacctctgagagcttcttggctgaagttctacacgaactgcggaat
gataaggccaatgaccaactcaagatcctcctcgtgtctatgttactggagcatccaacc
atcctctgcccttcttccactgtgggagaagaaacagcccttgaactactgtcagtcttc
tctcacacgccccagaaatccatcatcctcaagtgcaatgtcatgctggccatcaccaac
gtgataatatgcacatcctgcctggctacccacacaaagatggctgaagactggctggac
ctgctatttcaaacaatccaggacaccaacgactacagatgtggcgtttcccagcagcca
ttaagggccaccgcttgtgattgcctgcgagaaatggaaacttgtaaccctggtcttctc
tctcaaaagctagaggccttatatcttctgaaacagcaagaaaccacagttctgcatcag
tcctactgtatgctttacacacttgggctgaagaatgccataaagatcttggcgaaccaa
aaagacgtcactgatttagagttcaagagcatcctaggaggaaatgaggggtttgcatgg
aaaaccaatcagttgggattgacctctttgcccataaacatgatggtccaagttccacac
ttaccaccgggattggattgtaaagaactcaaatcaataatgtcttcactcctggaggag
tcttatttgctgacgcctatttcccagtctgccttacttagggagctcgtagaagttgtc
gcaatggttcccggactctctccaacgttatttaaatcgcagcttctgcgacttttcgga
acagcggacgtttcgctcatgcatgccacgctctttatgaaggacacgttcacagacagc
ctcttcactggagaggatgagaactttctgcttaagcgtctcgtaagcacagcccagcat
ccgctcttaagaattcccgaaaagctcttctacatggaatgcatcttgcatttccctgag
aaccgccccatatccagttgcggagaagagagtttacccgtcctggttacaccacgtcta
gcggcatctctccatccaacggttttcaatgatagtgctactatgctctgcaggctgaac
cttctttgtctggtccaccttgaagcagacgagggcgaagcggataaaggaatcgactac
ctgtttgatcacataatggctcttttgaaaatcgtagacaatgacagtagcagagaagtg
gtggtgacctctttcagagcgttgtttattttcctcatgcacttcaatggcattgaacaa
ctccccgagaagttgatcgagagattatgcgatatgtattccagacattcgagactcgct
ccgaatttgataggcctcgcagatcgcatccaggagcatctggacgacccagtctggtcg
gtgaagttgttgagaggccttcagaaatgcattatggaaatgcctccgttgcagttgacg
attcacaacttgagttggcacctcaaagtcttgagaagagtagctaaagaggggcagatc
acccagaagaacaccatttatcttcttctcaatgttctcatcaactcaaacttatgtgaa
agaggcaactggcaggttggaaatgcagttctggctgtttgccgcaatcttttggagcat
ccctctatcgatcaaacgtttatcgagttggctgatcttttgcaatacatatcggtgcat
tacgacgacacggatattaaggatcacgctcgtttctactacacattgctaactaaccta
tcatgggaaaagctgacaggggttctcgtcaaaggacttaacggaggacgtaccaaagaa
aggtcgcattctgcgattatggccgagagcgaggggatcgccagtaacctgaccgtgcat
aaaaccaaccggcatgttttacaactcataaaggtgcatgaaaaagccttccagagctct
ttggaaagttcagagccgttggagacaatggaagaggctaggaattggatggaggtttat
caaggacagtttcagactcctggatttggctctgaggtcatcttgaggtacaatctgact
catgcgaaagaatccgatcctttattcaatgaagtcttcacaatctgtctgcattttgag
ctgagagactcaaactacgcaaaggtaaatgacatacatgtaccatgtgtgttcaaagac
agaaagccacctgcggtcaaagtcaagctcaagccttttcaaccctaccctactacttta
cgcttaagtgccatatttaccactcgagatggacgttcttggcacagccaattgcctgac
gtgagcgtttcattccctgagatattcctccctctgcctttaccgccaaacacaccctgt
gaatgcaaagagcaagtgtttgacagcatctgggaggctgccgcctctgggaatcctgac
aaatctgctactagtctgttctgtttcaaaactggagatgaaagtcttactactctgatt
gagacacattttcagggttaccttattacggatcagccgatcgaaagatcgtggaaagtc
ttgttctttcttccacccatgtgccatgtgcttttgaagattacacaggctgaggatgcc
gttcaggtcagcattgcaacggacaactgggagctgttaccctttgtgaactcttacctc
caaaacattactgatcattgtagcgcaactgtaaaagatggctaa
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