Labeo rohita (rohu): 127173217
Help
Entry
127173217 CDS
T09007
Symbol
dtx3lb.2
Name
(RefSeq) uncharacterized protein dtx3lb.2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127173217 (dtx3lb.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127173217 (dtx3lb.2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127173217 (dtx3lb.2)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127173217 (dtx3lb.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_10
zf-RING_5
zf-RING_4
Baculo_IE-1
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127173217
NCBI-ProteinID:
XP_050978896
LinkDB
All DBs
Position
11:complement(10092323..10120633)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSEEPMEVTQTAYQQTNLSTGTDQDMVDVSQGSNDQAQSSLSSTDPHLMQNNFLLSNTDL
HAAGPGGQTSDPPPNDITLQNTDLYTARPGGQTSSQPPNDTTLQNTQVLTAQMTQSGHFF
NSQQALSSSSSDSQQNHQFSNAQYYSLPVVTQPTSISKQDSPVMGHNKQALSSSSSDSQQ
NHQFSNAQDYNAEGGDTQDSRQHLDQKNIENITTDQTNKSDSQAGKDSDHMKHQNSTTDQ
TNKAGSQAGKNLHASSAEGQDSISSLDKQMPQDIEMIKRNKSDSQPEKDACKNGDVNTTQ
SQPQDPQDVTTFKIKVTWPEHFSEIRGTKLQMALQSWFSKNVSVKVSIEKIKLMKDPHWA
EVQITPPTALETLKKHKTASLNFKHENMDVTAQIYTDEAHSGTVSQNTFKPDKNRIPSSQ
IRNSTHVTYAESDDTNNGGDVPAANFAPNEAKSTAQMAAGLNVPLFQFWYFHHIYRKEVE
QIEKQHGVSIDSDVSVSISPTKGSSPDCVSKASDDFQKLISKCVDDFSYVDISHNDMDST
IVKETLRNIHSEKTKIMLTRSANNCMFFGPRKLIEMIKREVGTTRLESKLDESQIDVDNN
ISPQSKSSLDMDTEDLPSHLEMSKAHWDLMNLTYTEQISQLETKYGVSFQKENLQSSLTI
KVQARSKEGQYISLESHAIRALTHLYQKLASATVSCKLTKPTYETLVAPMVEKLQQQHYC
VVATDVFSSWKLVGLPEHLGPAIADIEKKLQMKVFNNEMKKLIGYSGDIPHVRGIKWNQT
PGYEPGAVSGAAWDERVHLRSQSEAVTGFSEESEGNSRNDSKGAHAEEETCIICMDSFTN
KGKLKCGHEFCGECIRMSVESLGPICPVCKEVFGKMEGNQPNGAMDVRQMRLSLPGYPQC
GTIEIIYSIPNGIQTKKHPNPGKPFHGAVRYAYLPDNHEGNEVLALLRRAFDQKLIFTVG
TSTTSGVENAVTWNDIHHKTNISGGPQCYGYPDPDYLKRVKDELKAKGIE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggagccaatggaagtaactcagactgcttatcagcagactaatttgtcaact
ggcactgatcaagatatggtggatgtaagtcagggttctaatgatcaggcccagtcttca
ttaagcagtactgatcctcatctgatgcaaaacaattttctgctttctaatacggactta
catgcagcaggacctggaggtcagacatctgacccacctccgaatgacataacgcttcaa
aacacagacttatatacagcaagacctggaggtcaaacatctagccaacctccgaatgac
acgacgcttcaaaacacacaggtcctaactgctcagatgacacagtccggtcactttttt
aatagtcagcaggccttgtcttcatcgagcagtgatagtcagcaaaaccatcaattttct
aatgctcagtattacagtctacctgtagtcactcaacccaccagcatcagcaaacaagac
tctcccgtaatggggcataataagcaggccttgtcttcatcgagcagtgatagtcagcaa
aaccatcaattttctaatgctcaggactataatgcagaaggtggtgatactcaagactct
agacaacatctggatcaaaaaaacattgaaaacatcacaacggatcaaacaaacaaatca
gactcacaggcaggaaaggattcggatcacatgaagcatcagaacagcacaacggatcaa
acaaacaaagcaggctcacaggcaggaaagaacttgcatgcaagcagtgctgaaggtcaa
gactctatatcatctctggataaacagatgcctcaagatatcgaaatgattaaaagaaac
aaatcagattcacagccagagaaggatgcttgtaaaaatggtgatgtaaacacaacccaa
tcacaaccccaagatccacaggatgttactacatttaaaatcaaagtgacctggccagaa
catttttcggagatacggggaacaaaattacagatggcccttcagagctggttttccaaa
aatgtgtctgtcaaagtgtctatcgaaaaaattaaactcatgaaggatccacactgggca
gaggtgcagataacaccaccaacagctctagaaactttaaaaaaacacaagactgcatct
ttgaattttaaacatgaaaatatggatgtaaccgcacaaatttatacggatgaagcacat
tctgggactgtatcacaaaacaccttcaagccagacaagaacagaattccatcatcacag
attaggaattctacgcatgtgacttatgcagaatctgatgacacaaacaatggtggagat
gttcctgcagcaaattttgctccaaatgaagctaagagcacagctcagatggcagctgga
ctcaatgtccccctctttcagttctggtactttcatcatatttacagaaaggaggtggag
caaattgagaaacagcatggagtctcaattgattcagatgtgtcagtctcaatcagtcca
accaaaggctcaagccctgattgtgtgtctaaagcctctgatgattttcagaaacttatc
agtaaatgtgtggatgattttagttatgttgacatcagtcataatgacatggactcaact
attgtgaaagagactctgcgtaacatccattcagagaagacaaagattatgttgaccagg
tctgccaataattgcatgttctttggaccaaggaaactaatagaaatgattaaaagagag
gtggggacaacgagactggaaagcaaactcgatgaaagtcaaatagatgtagacaacaac
atttctccacaaagcaagtcttcattggacatggacactgaggaccttccttctcacctt
gagatgagcaaggctcattgggatttgatgaatcttacttacacggaacaaatatcacag
cttgaaacaaagtatggagtgtcatttcagaaagaaaacctgcagagcagtttaaccatt
aaggttcaagcccgatccaaagaaggtcaatatattagtcttgaaagtcatgccatcaga
gctttaacacatctttaccagaaacttgcttcagccactgtcagctgtaaactcacaaaa
cccacatatgaaactcttgttgctccaatggtagagaaacttcagcagcagcattattgt
gttgttgcaacagatgtattcagttcctggaagcttgttggactgccagaacatctcggt
cctgccattgctgatattgagaagaaacttcagatgaaggtgtttaataatgagatgaag
aaattgattggatattcaggtgacatccctcatgtaagaggaatcaaatggaatcagacg
cctggttatgaaccaggagcagtgagtggagcagcatgggatgagagagtacatttgagg
agtcaaagtgaagcagttacgggatttagtgaagaatcagaaggaaattctagaaatgac
agtaaaggtgctcatgctgaggaggagacatgtattatttgcatggacagtttcaccaac
aaaggaaaactaaaatgtgggcatgaattctgtggggaatgtataaggatgtcagtggag
agtctgggacccatctgtcctgtgtgtaaggaagtgtttgggaaaatggaggggaaccaa
ccaaatggagcaatggatgtaagacaaatgagactgagtctccctggatatccacaatgt
ggcactattgaaatcatatacagcatacccaatggtattcagacgaagaagcatccaaac
ccgggaaagccttttcatggggcagtgcgttatgcatacttgcctgacaatcatgaagga
aatgaagtacttgcactgctgcggagggcttttgatcagaaattgatctttactgttggg
acctctacaacttcaggtgtagagaatgctgtcacctggaatgacattcatcataagacc
aatatatctggtggacctcaatgttatggctatccagaccctgactacctgaagagagtg
aaggatgagttgaaggccaaaggcattgaatga
DBGET
integrated database retrieval system
