Labeo rohita (rohu): 127173229
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Entry
127173229 CDS
T09007
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127173229 (ift52)
Cilium and associated proteins [BR:
lroh03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127173229 (ift52)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF4159
Motif
Other DBs
NCBI-GeneID:
127173229
NCBI-ProteinID:
XP_050978937
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Position
11:complement(10167710..10173653)
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AA seq
435 aa
AA seq
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MDKEQRNTVIFNASKRELFTSNSGYKSLQKKLRAQWKIQSIKEELTLEKLQGVKLWITAG
PREKFTAAELEVLKQYLDSGGGLLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVIRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGVIDEENTGNNSQALSFVYPYGATLNVMKPA
VAILSTGSVCFPLNRPVLAFHQSKNAGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLT
TDSIPLNQIDAEDPEITDYTMLPDTGSLSDRLRVCLQEGDENPRDFTSLFDMSLLKLHTN
TLPSVLDAYKQLNVKHEPLQLITPQFETPLPPLQPAVFQPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGNLDKDKRDAKHILEHVFFQVVEFKKLN
EEHDIDTTEARFNTH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaacaacgaaacactgttattttcaacgcatccaagcgagagctcttcacc
tcaaactctggatacaagtccttgcagaagaaattaagagcacaatggaagattcaaagc
atcaaagaggagctcaccttggaaaaactccaaggagtcaagctatggatcactgcaggc
cctcgagaaaagttcactgctgctgagttggaggttcttaagcagtatctggacagtggt
ggaggtcttcttgtgatgctcggagaaggaggagaaatgaaatatgacactaatatcaac
tttcttctagaagagtttggcattatggtaaacaatgatgcagtaataaggaacgtctat
tacaaatatttccatcccaaagaagcacttgtctccaatggtgttctgaacagagagatc
agtcgtgcagctggtaaagtggtgacgggggtgattgatgaagaaaacacagggaacaat
tcacaggcactttcatttgtatacccttacggagccacattaaatgtgatgaagcctgcg
gtggccatcctgtccactggttctgtgtgttttccactcaacaggcctgttctggccttc
catcagtctaagaacgctggcaagttggcagttctgggctcatgtcacatgttcagtgac
caatacctggacaaggaggagaatagtaaaataatggatgttgttttccagtggcttaca
accgatagcattcctctcaatcagattgatgcagaggacccagagatcacagactacacc
atgttgccggacacagggagtctgtccgaccgtctgagggtgtgtctgcaggagggagac
gagaacccgcgagatttcacatctctctttgacatgtctttgctaaagctccacacaaac
actcttccctctgtcctggatgcttacaagcagctcaatgtcaaacatgaacctctccag
ttgatcacaccacagttcgaaacacctctgcctccgctgcagcctgccgtctttcagcca
gcctttagggaccttccgccacccatgcttgacctctttgaccttgatgagaccttttct
tctgagaaagtgaggcttgctcagctctcaaataaatgtaccgatgatgatctggaattt
tatgtacgtaaatgcggagacatcttaggcgtgacagggaatttagataaggacaaaaga
gatgccaagcacatactagaacacgtcttcttccaggtggtggagtttaagaagctcaat
gaagaacatgatattgacaccacagaagcaaggttcaacacacattga
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