KEGG   Labeo rohita (rohu): 127173256
Entry
127173256         CDS       T09007                                 
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
  KO
K16482  centriolar protein POC1
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127173256 (poc1a)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lroh03037]
    127173256 (poc1a)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    127173256 (poc1a)
Cilium and associated proteins [BR:lroh03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   127173256 (poc1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR19_1st eIF2A Ge1_WD40 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_Nup120_160 RMC1_N PROPPIN PEP5_VPS11_N Cytochrom_D1 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 127173256
NCBI-ProteinID: XP_050978966
LinkDB
Position
11:10647848..10730681
AA seq 417 aa
MSSVMDDPTLERHFKGHKDAITSLDFNSNMKQIASGSMDACVMIWNMKPQMRAYRFVGHK
DVVTCVQFSPSGHLVASASRDKTVRLWVPSVKGESTVFRAHTGTVRSVSFSSDGQTLLTS
SDDKSIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKNSRECIH
SFCEHGGYVNYADFHPSGTCIAAASTDNTVKVWDIRTHKLLQHYQVHSAMVNSLSFHPSG
NYLITASSDSTLKILDLLEGRLLYTLHGHQGPASCVAFSRTGDFFASGGSDEQVMVWRTN
FDSVDYSEVLEQKGTRDEKTSVRSRPSAQESEAAGLSDGRTSQKSGSTAPVRPASVDGPP
NAQQDSIPAALTSTLQHIVGQLDVLTQTVAILEQRLTLTEDKLKECIEMQRQSIAES
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgagctctgtcatggatgatccgacccttgagaggcattttaagggtcacaaagatgcc
atcacaagcttggacttcaactctaacatgaagcaaatagccagcggctccatggacgcg
tgtgtcatgatctggaacatgaagcctcagatgagggcctacaggtttgtgggacacaag
gacgtggtgacgtgtgtccagttctcaccctctggtcatctggtggcctccgcatccaga
gacaagacagtccggctctgggtgcccagtgtgaaaggggaatcaacagtgtttcgagcg
catacgggaacagtgcgcagtgtgagcttctccagtgatggacagacactcctcacctcc
tctgatgacaaaagcatcaaagtctggaccgttcatcgacagaaattcctcttctccctc
aaccagcacatcaactgggtgcgctgtgccaagttttcaccggatggccgtctgatcgtc
tctgccagcgatgataaaactgtgaagctgtgggacaagaacagcagagagtgcattcat
tcattctgtgagcacggcggatatgtgaattacgctgactttcacccgagcggcacttgt
atcgcagctgccagcacagataacacagtgaaggtgtgggacattcgcacacacaaactc
ctgcagcactaccaagttcatagtgcgatggtgaacagcctgtccttccatccatctgga
aactaccttatcacagcctccagtgactccacgctgaagatcttggacctgctggagggc
cgactgttgtacacgctccatggccatcagggtcctgccagctgtgtggcgttctcaagg
actggagacttcttcgcctcgggtggttcagacgaacaggtgatggtgtggaggactaac
tttgacagtgtggattacagtgaagtgctggagcagaaaggtactcgagatgagaaaact
tcagttcgcagccggccatcagctcaggagtctgaagccgctggtctgtctgatggccgt
acctcacagaagagtggcagcacagctccggtcagacccgccagtgtggacggcccgcct
aacgcccagcaggacagcattcccgctgcactgaccagcacccttcagcacattgtagga
cagttagatgtgctcacacagacggtggccattttggagcagcgattgactctgacagag
gacaaactgaaggagtgtatagagatgcaacgtcagtccatagctgaaagctga

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