Labeo rohita (rohu): 127173287
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Entry
127173287 CDS
T09007
Symbol
ccdc50b
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127173287 (ccdc50b)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
Others
127173287 (ccdc50b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
PIN_9
Motif
Other DBs
NCBI-GeneID:
127173287
NCBI-ProteinID:
XP_050979012
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All DBs
Position
11:complement(15761252..15784855)
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AA seq
360 aa
AA seq
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MSLHACVYILHDSRRSLIHGRRRILENVCQCFSVLEDGALAHSLQEQEIEQFYSTNIQKN
QAVQSDVRLARRLQEEEEQRADLHQDLRQLEEEDCRYAQMIQEELQRCAEETRRREKEDE
EIAKQLQEEEEMEMRRMRAAAGYDGNDCVSPLCEGLGIWEQVLQDAELARRLQEEEDMLP
HREQFPQSSGSEVDFIAAQVAQDEEIAHYMQRHPRRVKNRPQDLEIQPRPAEPRDEGNTT
TRKALQMLRERLNSDGLHSPVEEEDYTIENHLASPSCTALRNQHIHNIAEELDPTFKARK
RESQISTSPPSAGLCLAPRNPHSIFYDYLPEPTFIPPTKRQSDKAGRHRAKDKKENCKQQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcatgcatgcgtgtatatactgcatgacagtagacggagtttgattcatgga
cgcagacgcatcttggaaaacgtgtgccagtgtttctctgtgttagaggacggtgctttg
gctcacagtcttcaagagcaggaaattgagcagttctacagcaccaacatccagaagaac
caggcggtgcagagcgatgttcgtttagcccggaggctgcaggaggaagaggaacagcga
gcggatcttcaccaggacctgcggcaactggaggaagaggactgcagatatgcacagatg
atccaggaggagcttcagaggtgtgcggaagagaccaggaggcgagagaaagaggatgag
gaaatcgcaaaacagctacaggaagaagaagaaatggagatgagaaggatgagggctgcc
gctggttacgatggcaacgactgtgtttctccactctgcgaaggtttgggaatctgggag
caggtgcttcaggatgctgagctggcccgtagacttcaagaggaagaggatatgctgcct
cacagagagcagtttcctcagagctctggatcagaggtggacttcattgcggctcaagta
gcccaagatgaggagatcgcccactacatgcagcgccatccgagaagagtcaaaaacagg
cctcaagacctagagatccagcccagacctgctgaaccaagagatgaaggaaacaccaca
accaggaaggctcttcagatgttgcgagagaggctgaactcagacggactgcattcacct
gtggaagaggaagattacaccattgaaaaccatctagcaagcccatcatgcactgcgctc
cgaaaccaacacatacacaacattgcagaggaactggacccaacgttcaaggcgaggaaa
cgcgagagccaaatttccaccagccccccgtcagcaggtctatgtttggcccctcgaaac
ccgcacagtatcttttatgactatttaccagaacccaccttcataccaccaacgaaacgg
cagagcgacaaagcaggacgtcacagagccaaagacaagaaagagaactgcaaacaacag
tga
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