Labeo rohita (rohu): 127173309
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Entry
127173309 CDS
T09007
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127173309 (ddx19b)
03015 mRNA surveillance pathway
127173309 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127173309 (ddx19b)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127173309 (ddx19b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127173309 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF8069
Motif
Other DBs
NCBI-GeneID:
127173309
NCBI-ProteinID:
XP_050979064
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All DBs
Position
11:1183968..1195204
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AA seq
479 aa
AA seq
DB search
MASDSWAQAVDEQEAAAESIGSLQINEKDDKLKAEANGAKTEGDGEKTEDDDKDDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPDNKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEETVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagattcgtgggcccaggctgtcgatgaacaagaagccgcagcggaatcgata
ggcagcttgcaaataaatgaaaaagatgacaagctgaaagctgaagcaaatggggcaaaa
acagaaggagacggagagaagaccgaagacgatgataaagacgacaaggcagcacagtca
ctactgaataaactgatccgcagtaatctagtaaacaccaccaatcaggttgaagtcctt
cagagggatccgagctctccgctgtactccgtcaagtcctttgaagagctacgattgaaa
cctcagctgcttcaaggagtgtatgccatgggtttcaacaggccatccaaaatccaggag
accgcattgcccatgatgcttgcagaacctccacagaatctcatcgctcagtctcagtca
ggcacgggtaaaacggctgcctttgtgctggccatgttgagtcacgtggaccctgataac
aaatggcctcagtgtctgtgtgtgtcccccacatacgagctcgccctacagacgggcaag
gtcatcgagcagatgggcaaattctaccctgaagtccaactagtgtatgccatcagagga
aacaaattggagcggggaacaaaattacaagaacagatcgtgattggcactcctggtact
gttttggattggtgccagaagcttaaattcatcgaccccaagaagatcaaggtgtttgtc
ctggatgaagctgatgtcatgatcgccacacagggccaccaagaccagagcattcgaatc
cagaggatgcttcctaaaagttgccagatgctgctgttctcggcgacatttgaggaaacc
gtttggaactttgcgaagaggatcgttcctgaccccaacatcattaaactcaagcgtgag
gaggagactctggacaccatcaagcagtactacgtcatctgcaacagcaaggaggagaaa
ttccaggctttgtgcaacatctacggtgccattactatcgcacaggccatgatcttctgc
cacaccaggaaaaccgcggggtggctggcaggagagctgtccagggaaggccaccaggtg
gcgctgctcagcggagagatgcaggtggagcagagggcggcggtcatcgaacgtttccgt
gatggcaaggagaaagttctcgttaccactaatgtctgcgctagaggtattgatgtggag
caagtttcagtcgttatcaacttcgatctgccggtggacaaggatggcaaccctgacaac
gagacgtatttgcacagaatcgggcgtactggacgatttggcaagagagggctggcgatc
aacatggtggacagcaaatttagcatgaacatcctcaatcgcatccaggagcacttcaat
aagaaaatcgagaagctggacacggatgatttggatgaaatcgagaaaatcgccaactga
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integrated database retrieval system
