Labeo rohita (rohu): 127173525
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Entry
127173525 CDS
T09007
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127173525 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127173525 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127173525 (itgb6)
04810 Regulation of actin cytoskeleton
127173525 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127173525 (itgb6)
04515 Cell adhesion molecules [BR:
lroh04515
]
127173525 (itgb6)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127173525 (itgb6)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127173525 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
127173525
NCBI-ProteinID:
XP_050979400
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All DBs
Position
11:6726276..6755020
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AA seq
779 aa
AA seq
DB search
MGIVLFYLVLHFWLVTVGGTCSQFNALSCDECLQLGPHCAWCTLQNFTDFFSIDERCDTP
EALLQKGCSGEFVEFPITNVKVLKDQGLGKSAGLINVSYIAPQKMRLQLRPGSQLTFQMQ
VQEPEDHPVDIYYLMDLSASMFDDLKMIKDLGSTLSREMAKLTSKFRLGFGSFVEKPVLP
FIKITREELANPCRSVDYECLPTFGYRHLLSLTSSTEKFNEIIKKQQVSANIDVPEGGFD
AIMQAAVCGDRIGWQNDSMKLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDDSNEYSMT
AHLEYPTLGQLVDKLVENNILLIFAVTDNQRQNYENYARLIPGATVGVLAPDSRNILELI
MTSYKELRSEIDLEVLGNTEGLQISFTALCQDGTIIPGHKSCSNVKAGDVVSFNVTVELK
GCLAGPRRFSLRPVGFQDALEIELESQCVCDCHQTPEANSTYCSRGRGALECGACVCNPG
FVGPKCECTEGQEQISDCRAHEGAEMCSGLGECFCGQCVCHPSSFGRVYGPYCECDNFSC
LRFRGELCGGHGDCDCGECVCHRGWMGEFCNCSTSNRSCVAPDGSVCSGRGKCVCGKCEC
TVPGASGERCQRCPTCGDICSLPRPCVECYLKAKDPSDECAVKCNSLHATVSNSTDFEES
RAALCTLQSEDNCLLSFSLVDSDYGSIIYNPKVYDCHEPPNAPLIALGVCMSVLIIGITL
LVIWKFLVSVHDRKEVAKFEAEKAKAKWQSGTNPLFKSSTSTFKNVTYKSTGQQKSDIS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggattgttttattctaccttgtccttcacttctggctcgtcactgtcggagggacg
tgttctcaatttaacgctctctcctgtgacgagtgtctgcagctggggccacactgcgcc
tggtgcacactacagaatttcaccgactttttctcaatcgacgagagatgcgacacacca
gaggctcttcttcagaaaggatgctccggcgaatttgtggagttccccatcacaaacgtc
aaagtgctgaaggatcaaggcttaggaaagagcgccggcctcattaacgtttcatacatt
gcaccgcagaagatgcgcctccagcttaggccaggaagtcagctgacctttcagatgcaa
gtgcaggaaccggaggaccatccggtagacatttattacctgatggacctgtcggcatct
atgtttgatgatctgaaaatgatcaaagacttgggttccacgctctccagagagatggct
aagcttaccagcaaatttagactaggattcggctcttttgtggagaagccagttctgcct
tttatcaagataacacgcgaagagttggccaatccctgcaggagtgttgattatgaatgt
cttcccacatttggatacagacatcttctgtcgctaacaagcagtactgagaagtttaat
gagatcatcaaaaagcagcaggtatcggcgaacatcgacgtgccagagggcggttttgac
gccatcatgcaggcagccgtgtgcggggacagaattggctggcagaacgattccatgaag
ctgctggtgttcgtgagtgatgcggattctcattttgggatggacagcaaaatgtctggc
atcgttgttccgaatgacggggagtgtcacctggatgacagtaatgagtattccatgact
gcccatctggaatatccaacattagggcagcttgtcgacaaattggttgaaaacaatatc
ctccttatatttgctgtgactgacaatcagagacagaactatgagaattatgcgaggctg
attcctggtgctactgtgggggtgttggcacccgattcaaggaacattctggaactcatc
atgacctcatataaggaactgaggtcagagatcgatcttgaggttctgggcaacactgag
ggtctgcagatttccttcacagcactctgtcaggacgggaccatcatccccggacataaa
agctgctcaaatgtcaaagctggtgatgtggtatcttttaatgttacggtcgagttaaaa
ggctgtcttgctggtccacggaggttttccttgcggccggtgggtttccaagatgctctg
gagatcgaattggagtctcagtgtgtgtgtgactgccatcaaacccccgaagcgaacagc
acctactgcagccgaggacgtggggcgctggagtgcggcgcctgtgtgtgcaatccaggt
ttcgtggggccgaagtgtgagtgcacagagggccaagaacaaataagtgactgcagggca
catgaaggtgcggagatgtgcagcggcctcggcgagtgtttctgtggacagtgtgtgtgt
cacccgtccagtttcggacgcgtgtacgggccgtactgcgagtgcgacaacttttcctgc
ctcaggtttagaggagagctttgcggaggacacggagactgtgactgtggtgagtgtgtg
tgtcacagaggttggatgggagagttctgtaactgcagcaccagcaaccgctcatgcgtg
gctccggatggttcagtctgcagcggacggggcaagtgcgtgtgtgggaagtgcgagtgc
accgttcccggagcctcaggagagcgttgccaaagatgcccgacctgtggagatatctgc
agcttacccaggccttgtgtggagtgttacctcaaagctaaagacccatcggacgagtgt
gctgtaaagtgcaactccctacatgccactgtcagcaattccacagattttgaggagagt
cgggcagcattgtgcaccttacagagtgaggacaactgtctactgtctttcagcttggtg
gacagtgattacggcagcatcatttacaatcccaaggtttatgattgccatgagccgcca
aacgcacccttgattgctctgggcgtgtgcatgtctgtcctcatcattggcattacgctc
cttgtgatctggaagtttctagtttctgtccatgaccggaaagaagttgccaagtttgag
gcagagaaggcgaaagcgaaatggcagtcgggcacaaatcctcttttcaaaagctcgacg
tcaacctttaaaaatgtgacctacaaaagcacagggcagcagaaaagtgatatttcttag
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