Labeo rohita (rohu): 127173659
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Entry
127173659 CDS
T09007
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127173659
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
127173659
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_11
TPR_8
TPR_14
TPR_1
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_Slam
SNAP
TPR_7
TPR_15
TOM20_plant
z-alpha
Motif
Other DBs
NCBI-GeneID:
127173659
NCBI-ProteinID:
XP_050979523
LinkDB
All DBs
Position
12:19547905..19552125
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AA seq
479 aa
AA seq
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MSEMSSIQDSLQSKLDQLECHFTWGIKKEDLVLMDILNRLEEQAKMGLGGEQGVARTHCS
LGYVKFLLGRNEEVFTHLLKSETLIKENLGVNCDKTLIVTYGNFAWINYHMKNYTECESY
LMKLQKINETCSSEPSSVSEMLGEKGWAYLKFSRKYYDKAIEVFQKAVELDPENSEWNAG
YAKALFRTETGTLCTVDSPAIKQLERAIEIDPDDDASRVLLGVKLLFCSKKLMKDSEKLI
ETALNGSPEHPHVIRYVGKFFRNQGSVDRSIALLKKALEKSPNSGFIHHQLAMCYKTMKI
NLQKEKREVNRFEINIARKQCIYYLEKATSLKASFVIAMSELALQYGEKRDLPKAEELFA
QTFKTAREKNDSLHVVHYYYAEFQQYSKRREDLAIRHYTECLKMSPHTSEGDRSAKKLKN
IAQRYMKDDPGDWKANEILGLIYQIKGEMFGDTKSYAATSGNEEDDESLSNLCEINLKI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatgagttcaatccaggacagtttacaatcgaaactggatcagctggagtgt
cacttcacttggggcattaaaaaagaggatctagtcttgatggatattctcaataggctt
gaggaacaggccaagatgggtctaggaggggagcagggagttgcacgaactcactgctct
ttaggatatgtgaaatttcttcttgggcgcaacgaagaggtctttactcacctgttgaaa
tctgagacgctcattaaagaaaacctcggtgtcaactgtgacaagactctcattgtcacc
tatggaaattttgcctggataaactaccatatgaagaactacacagagtgtgaaagttac
ctgatgaagcttcagaagataaatgaaacatgttcaagtgagccttcatctgtttcagag
atgcttggtgaaaagggatgggcctatcttaaattctcacgcaaatattatgacaaagcc
atagaggtttttcagaaggctgtggaactggatccagaaaatagcgagtggaacgctggt
tatgcgaaagctctgtttcgcactgaaactggtacactttgcactgtggattcacctgca
atcaaacagctggaacgggccattgagattgatccagatgatgatgcctctagagttctt
ctaggagttaaacttttgttctgttccaaaaagttgatgaaagattctgagaaactgata
gagacagctctgaatggctctccagaacatccacatgtcataagatatgtagggaaattc
ttcaggaatcaaggatctgtagacaggtcaattgcactgctgaagaaagcacttgaaaag
tcaccaaactcaggtttcatacatcatcagttggcaatgtgctacaagaccatgaaaata
aatttacagaaagaaaaacgggaagtaaataggtttgagataaatattgcacgaaaacag
tgcatttactatttagaaaaggcaacttctctaaaagcttcctttgtcattgccatgagt
gagcttgcacttcagtatggagagaaacgtgatctgcccaaggcagaggaactatttgcc
caaacatttaaaacagctagagagaaaaatgatagtttgcatgtagtacattattactat
gctgagttccagcagtattctaaaagacgcgaggacttagcaatcagacactacacggag
tgtttgaaaatgagtccacatactagtgagggggatagaagcgcaaagaaactgaagaac
attgcccagagatatatgaaggatgacccaggtgattggaaggcaaatgaaatactggga
ttaatatatcaaataaaaggggaaatgtttggggacaccaagagctatgcagccacttca
ggcaatgaagaagacgatgaatccctcagtaatctttgtgagattaatctgaaaatataa
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