Labeo rohita (rohu): 127173669
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Entry
127173669 CDS
T09007
Symbol
vclb
Name
(RefSeq) vinculin b
KO
K05700
vinculin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04520
Adherens junction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127173669 (vclb)
04520 Adherens junction
127173669 (vclb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127173669 (vclb)
04810 Regulation of actin cytoskeleton
127173669 (vclb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127173669 (vclb)
04147 Exosome [BR:
lroh04147
]
127173669 (vclb)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127173669 (vclb)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127173669 (vclb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Mob_Pre
TipAS
Motif
Other DBs
NCBI-GeneID:
127173669
NCBI-ProteinID:
XP_050979535
LinkDB
All DBs
Position
12:complement(1854908..1897907)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMRRDMPPAFIKVENACTKLVQAAQMLKADPYSVQARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSQGKGVEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMAQAKNWLRDPHAQPGDPGEQAIR
QILDEAGKVGELCAGKERRDIVGTAKTLGQLTEQVSDLRARGSGTSPVAIQKAQQVSQGL
DVLTGKVENAARKLEAMTGSKQAIAKRIDAAQSWLADPHGGPEGEENIKALLGEARKIAD
LCEDPKERDDILRSMGEIAALTAKLSELKKAGKGDTPEARALAKQIATALQNLQSKTSKA
VANTRPAKAAVHLEGKIEQAQRWIDNPTMDDSGVGQAAIRGLVAEGRRLANALPASQRSD
LLGKCEEVEHLMAQLAELAARGEGDSPQARAVAQQLQDTLKELKGKMQEAMTQEVSDIFS
DTTTPVKLLAVAATAPPDAPNRDEVFDERAANFENHAGRLGATAEKAAAVGTANKSTVEG
IQAAVKSARDLTPQVVSAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDLDKCQVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
ETVKAASDELSRTISPMVMDAKAVAANIQDQGLQRGFLDSGYKILGAVAKVREVFQPQEP
DFPPPPPDLEHLQISDNAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQQAGEMVSEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagagagtatcctggagccggtggctcagcagatc
tctcatctggtcatcatgcatgaggagggagaggtggacgggaaagccatcccggatctc
accgctcccgtagccgccgtgcaggcagctgtcagcaacctggtccgggtgggcaaagag
acggttcagaccactgaggatgccatcatgaggagagacatgccgcctgcctttataaag
gttgagaacgcgtgcactaaattggttcaggctgctcagatgttaaaggccgatccttat
tctgtccaagcccgagattatctgatcgacgggtcccgcgggatcctctccggcacctcc
gacctgcttctgacattcgatgaggccgaggttcgtaaaatcatccgtgtgtgtaaaggg
attctggagtatctgaccgtggctgaggtggtggagtctatggaggacctgatcacttac
accaaaaacctgggaccaggcatgacgaagatggctaagatgattgatgaacgacagcag
gaattaacgcatcaggagcacagagtcatgctggtcaattccatgaacaccgtcaaggag
ctgctgcctgttctcatctcaggcatcaagatcttcgtaacgaccaagacgtctcagggt
aaaggtgtggaggaggctctgaagaacaggaacttcaccgtggagaagatgagcgctgaa
atcaatgaaatcatccgcgtgctgcagctcacgtcatgggacgaggacgcctgggccaat
aaggacacagaggccatgaagagagcgctggctctgatcgactccaaaatggcccaggcc
aagaactggctccgagatccgcacgcccagccaggtgacccgggcgaacaagccattcgt
cagatcctcgacgaggcgggtaaagttggcgaactctgcgctgggaaagagagacgagac
atcgtgggaacggccaagacgcttggacaacttaccgagcaggtgtccgatctgcgggcc
aggggttcagggacgagtccggtggccattcagaaagcgcagcaggtgtctcagggtctg
gacgtcctgacggggaaagtggaaaatgcggcgcgtaaactggaagccatgaccggctcc
aaacaagccatcgccaagagaatcgacgccgctcagagctggctggcggatcctcacggc
ggtccggagggagaggagaacatcaaggctcttctgggcgaagcgaggaagatcgccgac
ctctgcgaagatcccaaagagcgcgacgacatcctgcgcagcatgggcgagatcgccgcc
ctcaccgccaaactctccgagctcaagaaagcaggtaagggcgacacccctgaggctcga
gctctcgcgaagcagatcgccacggctctgcagaacctccagtccaaaaccagcaaagcg
gtggccaacactcgacccgccaaagccgccgttcacctggaggggaagatcgagcaggcg
cagagatggatcgacaaccccacgatggacgacagcggcgtcggtcaggctgcgatccgc
gggctggtggccgagggccgtcgtctggccaacgctctgccggcgtctcagaggtcagat
ctgctgggtaaatgtgaggaggtcgagcacctgatggcgcagttagccgagctggcggcc
cgcggggagggagacagtcctcaggcccgcgccgtcgctcaacagctgcaggacacgctt
aaagagctgaagggtaagatgcaggaagccatgacacaggaagtgtctgacatcttcagt
gacacgactacacctgtcaaactcctggcggtggcagcgacggctcctccagacgcgccc
aacagagacgaggtgtttgatgagcgggccgctaactttgagaatcacgcgggtcgtctg
ggagccacggcggagaaagcggccgccgtcggcaccgccaacaagagcacggtggaggga
atccaggcggccgtcaaatcagccagagatctgacgcctcaggtcgtctctgcagctcga
atccttctgaagaatcctggaaaccaggcggcttacgaacactttgaaaccatgaaaaat
cagtggatcgacaatgtcgagaaaatgacaggtctggtggatgaagcgattgacaccagg
tctctgttggacgcgtcagaagaagccattaagaaagatctggacaagtgtcaggtagct
atggccaatcaccagcctcagatgctggtcgccggagcaaccagcatcgcccgacgagcc
aatcggatcctgctggtggcgaagcgagaggtggagaactcagaagacccgaagttcaga
gagaccgtgaaagcggcgtccgacgagctcagcagaaccatctcacccatggtcatggac
gccaaagctgtggccgccaacatacaggaccaaggcctccagaggggcttcttggactcg
ggttataagatcctgggtgccgtagctaaagtccgggaggtgttccagccgcaggagcca
gacttccctcctccacctccagacctggagcacctgcagataagcgacaacgccgctcct
ccaaaacctcctctgccggagggtgaagtgcctcctcccagacctccaccgccggaggag
aaggacgaggagttccccgagcagcaggccggagagatggtcagcgagcccatgatggtg
gccgcccggcagctgcacgacgaggcccgcaagtggtccagcaaaggtaatgacatcatc
ggagccgccaagcgcatggctctgctgatggccgagatgtctcgactggtccggggcggc
agcgggaataagcgagcgctcatccagtgcgccaaagacatcgccaaagcctccgacgaa
gtcacgcgcctcgccaaagaagtcgccaaacagtgcacagacaaacgcatacgaaccaac
ttactgcaggtgtgtgagaggattcccaccatcagcacacagctgaagatcctttccaca
gtgaaggccaccatgttgggacgcaccaacatcagcgaggaggaatcagagcaggccacc
gagatgctggtccacaacgctcagaacctgatgcagtcggtgaaggagacggtgagagaa
gccgaagccgcttctatcaagatccgcacggatgccggattcaccctgcgctgggtccgc
aagacgccctggtaccagtga
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