Labeo rohita (rohu): 127173691
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Entry
127173691 CDS
T09007
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127173691 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127173691 (grin2cb)
04082 Neuroactive ligand signaling
127173691 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127173691 (grin2cb)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127173691 (grin2cb)
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
127173691
NCBI-ProteinID:
XP_050979563
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All DBs
Position
12:10270880..10321111
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AA seq
1328 aa
AA seq
DB search
MATPQGCWGPSLQLLLFFHLLLSVVPPCRGRPFFGPPSVNVAVVFSGLAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIIGISGGSAVVIPHKAEGSTFLQMGASIEQQIHAMFKVMEEYNWGNFVVITSLY
PGYETFVDYIRSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLLGPGYIWVVPSLAVGNPEVSPPDSFPVGVISIITDRWRKTLRQRVRE
GVAVIVKGVHSFHKNRGFIPEGHMDCNSPVKSFANNSLFRHMLNVSWEHKDLSFNIDGYL
TNPSMVIIALDRERHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESVTGHTEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDHLDFLLAISRGIYSCFNGVEDIGRSTSIQNPDITANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWSRHSGSLPARIPLVTTTEKVPGHFSYITN
VTENHIPHMQRSITPPFTQHTKTTSPPPPMINHRVLTRPTPLRYTLPARTRGFYDGMLPV
SSLSTPHLAMHDPPSDMARPGSSFVPYRDIYTEHHKPCHSDFSDAVRRKKRPQNLMVESM
DLRGLHDYKDQSMCHNEANSFAENHLSSSFSENPFVAETACNSCIKTYFDPAFDDIPLIG
KRKLHRRPSFLKATWGPDRVRFPGDRPTAAAPPQVTIPDLFPCVDVHGRVRNTLCYAQPM
DHNYLHAFRRNNRKSQKLRHSQSTRLPSYKEAIFHNVAAVRRASSLVHRPYSYPELPVYQ
SPLSYGPAELCNIFPCMGHPSDSVYGGYRAPTHLQDDHLVSVPGSRVVHSSPIVPMTWGR
ISSLESEV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcaagggtgttggggtccctctcttcaactcctcctcttcttccatctg
ttactcagcgtagtgcctccctgccggggacgtccgttcttcggtcctccttcggtcaac
gtggctgtggttttcagtggtttggcccaccacagtgagatcaagggccgtctgagtcca
gaaaacttcctagacatgcccctggaagtgaaccctatcaccgtgctggtgaatgacact
aaccccagggctttactcacacgtctctgtcagactatggcagcagagagcctccacgga
gtggtgtttgaagatgacgtggactcagaagctgtggcacaaatcttagactttatctcc
tctcagacgtccatccccatcataggcatcagtggagggtcggcagtagtcatcccgcat
aaagctgaaggctctacttttctccagatgggagcctctatagagcagcaaatacatgcg
atgttcaaagtgatggaggagtacaactggggtaactttgtagtcatcaccagcttgtat
cccggctacgagaccttcgtggactacatccgctccttcacagacaccagctacttcctg
tgggagctgcaggatgtgctaagctttgagatgtccgtgggggccaacgatatccgcaca
cgtagactactgcagcaggtggactcgcaggtatatctagtgtactgttcccacgaggag
gcacagtacttattcaggatggcctctgatgtggggctgctagggcctggatacatctgg
gtcgtccccagtctggctgtggggaaccctgaagtatcccctccagacagtttcccagtg
ggcgtcatcagtattatcacagaccgctggaggaagacactgcgccagagggtacgggaa
ggagtcgcagtcatagtaaaaggggtgcacagtttccacaagaacagaggattcattccc
gagggtcacatggactgcaatagtcctgtcaaatcgttcgccaacaattctctcttcagg
catatgctaaatgtgtcatgggagcataaggacctctccttcaacattgatggctatctc
accaatccttccatggtgatcattgctttggaccgtgagagacattgggacaaggttgga
agctacgagggagggattcttcagatgcgataccctgtatggccccgttacggcagcttc
ctggaacccgtgtccgacaaccgccacctgactgtagcaacgctggaggagaggcctttt
gtcatcgtggagagtgtcgatcctgccacgggcacttgtgtacgcaatactgtgccgtgt
cgccggcaatccaacaggactgaaagtgtaacaggtcacactgagccttacaccaaactc
tgctgcaaaggtttctgcatagacatcctaaagaagctctcacgcaccatcaagttttca
tacgacctttatctggtcaccaacgggaagcatggcaagatggtccgtggcgtctggaac
gggatgattggagaggtcttctacaagcgtgcagatatggcaattggctctcttaccatc
aatgaggagcgctcagagattgttgacttttcagtgccgttcgtggagactgggattagc
gttatggtggccagaagcaacggaacagtctcaccttctgccttcctggagccttacagt
ccagccgtgtgggttatgatgttcgtaatgtgcctgactgttgtggcagtcaccgttttc
gtgtttgaatacttcagccctgttggctacaaccggagccttgtcagtgccaaagcccct
gggggtccaacttttaccattgggaagtctgtctggctcctgtggggaatcgtcttcaac
aactctgttcctattgaaaaccccaaaggcacaacgagcaaaattatggtcctggtctgg
gctttttttgctgtaattttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtatattgacactgtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcgctttgggacggtcccaaacggcagcacagagaggaacatt
cgaagcaattaccctgacatgcacacccacatgataaaatacaaccagaagggagtggaa
gaagctctcaacagccttaaaacagggaagttggacgccttcatatatgatgcagcagta
cttaattatatggctggcaaggatgagggctgcaagctggtcaccattggtagtgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctggctctcctccagttcctgggagatggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaacgaggtcatgagctccaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggccatgggcctcagcctgctggtc
tttgcttgggaacatttactttactggaaactgaggcactctgtccacaagtctgatcat
ttagacttcctgctggccattagtaggggcatatacagctgcttcaacggtgttgaagac
attggcagatctaccagcatacagaatccagatatcacggccaattacgcccaggccaac
atgctgaaaatgctgcagacagccaaggacattgtctcctcagccaaagtggaaaactca
ttggataacgccaccaaaaccattgagaactggagcagacacagcggcagcctgccagca
cgtatcccactggtcaccacgactgaaaaagttcctggtcacttctcttacattaccaat
gtcacagagaaccacatacctcacatgcagcgttccataactccacctttcacacaacac
accaaaaccacaagcccaccaccaccaatgataaaccacagagttttaacacggcctact
cctcttcgctacacgcttcccgccaggaccagaggtttttatgatggaatgcttcctgta
tcaagtctgagcacacctcatctagccatgcatgatcctccatccgacatggcacgtcct
ggatcttcctttgttccgtatagagacatctacactgaacaccacaaaccttgccacagt
gatttctcagacgcggtcaggcggaaaaaacgacctcagaatcttatggtggagtctatg
gatttgagaggacttcatgattataaagaccaatctatgtgtcataatgaagcaaacagc
tttgctgaaaaccacctgtcgtcatctttcagcgaaaatccttttgtagcagaaacagct
tgtaattcctgcatcaaaacgtatttcgaccctgcattcgatgacatacctctaataggg
aaaagaaagcttcatcgcagaccttcgttcctcaaagccacttggggtcccgacagagta
cgatttccaggtgacagacccaccgccgcagcccccccacaagtaactataccagacctg
ttcccatgcgtggacgttcatggacgggtgaggaacaccctgtgttatgcccaaccgatg
gatcacaactaccttcacgccttccggcgaaacaacaggaaaagtcagaagctcagacac
agccagtccacaaggcttccgtcttacaaggaggcgattttccacaacgtggcagctgtc
agaagggcgtccagcttggtacatagaccctactcctatccagagctgccggtctaccag
agcccactgtcatatggacctgccgaattatgcaacatcttcccctgcatgggacatccc
agtgacagtgtatatggagggtatagagcacccacacacctacaggatgaccatctagtg
tctgttccaggcagcagggtggttcatagcagtcctattgtgcccatgacatggggcaga
atttcaagtctggaatcagaggtgtga
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