Labeo rohita (rohu): 127173704
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Entry
127173704 CDS
T09007
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127173704 (trim16)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127173704 (trim16)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127173704 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CC_BshC
Motif
Other DBs
NCBI-GeneID:
127173704
NCBI-ProteinID:
XP_050979582
LinkDB
All DBs
Position
12:complement(1943268..1953344)
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AA seq
573 aa
AA seq
DB search
MGDVVLTADLPASSLDSDKLKKNSEESNLKSTEEKINGSQETEKQNGEEKDSKAAEESKI
QEDLKESEDPQKPQDEEEVLGPNDVTCDSCIDRPCRAKKSCLTCLVSYCEAHLRPHLENV
KFQSHRLVEPLRDIERRTCETHRCPLELYCCADACCVCQECLKEEHRGHKAVPITEARKK
IEKELQDKQTDMVKTVTAAENAINKLQVNTVSIEASVKEVRVVIEEQFNILLAAVEQAKK
EVSEILEVEERQALKQAEGIRVHLEQRCTELKKTQSQVEKITKNKNDIDFLHEFSQWKKE
TVDVSLPGVYIGLMDRLQSFSRVIKQSTTEICDNLLTSYTNKLKDTCKNDNVGIKTTVYA
IIAAKQNMSIPNPETRDDFLKYVTPLTLDADTAHQYLRLTEERKKVTNTTPWQQSYPDLP
ERFEHFKQVLTVESFYLGRHYFEVDMKGEGTHVGLTYKSIDRKGSESNSCITGNNFSWCL
QWNGRSFSAWHSDVETPLNSPKATRIGVYVDYSSGVLAFYDVTNDMALIHKYKAEFLEPL
YPAFWLSKKECVVLLEPGPTSSLSSPSPVSSPK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgtggtgctgacagcagatctgccagcaagcagcttagactctgataaactc
aagaagaactctgaggagagcaatctgaagtccacagaggagaagatcaatggatctcaa
gagacagaaaaacagaacggagaagaaaaagacagcaaggccgctgaggaaagcaagatt
caggaagacctcaaggaatcggaggaccctcagaagcctcaggatgaagaagaggtgctg
gggccaaatgatgtcacctgtgactcctgcatcgaccggccgtgccgcgcaaagaagtcc
tgcttgacctgcttggtgtcgtactgtgaggctcacctgaggccgcacctggagaacgtc
aagtttcagagccacaggctggtggagccgctgcgggacatcgagagacggacgtgtgag
acgcaccgctgcccgctggagctttactgctgcgcagacgcgtgctgcgtctgtcaggag
tgcttaaaggaggaacaccgcgggcacaaagccgtacccatcacagaggcacgcaagaag
atagagaaagaacttcaggacaaacagacggacatggtgaagacggtcacagcggcagaa
aacgccattaacaagttacaggtcaacactgtgtctatagaggcatctgtgaaggaggtg
cgtgtagtgatagaggagcagttcaacatactgctggcagccgtggaacaggcgaagaag
gaagtgagtgagattttagaggtggaggagcgacaggcgctgaagcaggccgaaggaatt
cgggttcatctggaacaacgctgcacagagctgaagaaaactcagagtcaggtcgagaaa
atcaccaagaacaaaaatgacattgacttcctgcatgagttttcacagtggaaaaaggaa
actgttgatgtgtctttacctggcgtttatattggcctcatggatcgactgcagtcattc
agtcgtgttatcaaacagtccacgacagagatatgtgacaacctgctgacctcatatacc
aacaaacttaaagacacttgtaaaaacgataatgttggcataaagacgacggtttatgcc
attattgctgcaaaacagaacatgtcaattccgaacccagagactagagatgacttcctt
aaatacgtcacgcctctgaccttagatgcagatacagcccatcagtatctgcgtctgaca
gaagaacgaaagaaggtgacaaatacaacaccgtggcagcaaagctatccagaccttccc
gagcgcttcgagcactttaaacaggtgctgacagtcgagagcttctacctgggccgccac
tatttcgaagtagatatgaaaggagaaggcactcacgtcggcctgacgtataagagcatc
gaccgcaagggatctgagagcaacagctgcatcacaggaaacaacttctcctggtgtctg
cagtggaacggacgcagcttctccgcgtggcacagcgatgtggagacgccgctcaacagc
ccgaaggccacaaggatcggcgtgtacgtggattattccagcggcgtgctggctttctat
gacgtgacgaatgacatggcgctcatccacaagtacaaggctgagtttttggagccgctt
tacccagcattctggctttccaagaaggaatgtgtcgtgcttttggaaccaggaccaacg
tcctccctgtcatctccatctcctgtttcctctcccaaataa
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