Labeo rohita (rohu): 127173726
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Entry
127173726 CDS
T09007
Symbol
ebf3a
Name
(RefSeq) transcription factor COE3a isoform X1
KO
K09103
early B-cell factor
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127173726 (ebf3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127173726 (ebf3a)
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Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
127173726
NCBI-ProteinID:
XP_050979608
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Position
12:complement(4118395..4222939)
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AA seq
597 aa
AA seq
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MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNSEKTNNGIHYKLQLLYSNGV
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTATPYLENAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTM
LVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQR
LQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNH
NQIPSLANTASHGGMMGVNSFGGQLAVNVSETSQVGYSRNTSSVSPRGYVPSSTPQQSNY
NTVSNSMNGYGNAGMPNLGVPSSPGFLNGSSANSPYGSKYQVVPSSPTMAASSVSLSSNC
SSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaaatataccgagaggggggaccactatgaaagaggaaccgctg
ggcagtggcatgaatccggtccgatcgtggatgcacacggctggggtggtggatgcgaac
acggccgcccagagtggagttggtctggcacgggcgcactatgagaagcaaccgccatcc
aacctcagaaaatccaattttttccacttcgtcctggcgctttatgacagacagggacag
ccagtggagatcgaaaggacagcttttgtggactttgtggaaaaggagaaagaaccaaac
agtgaaaaaactaacaatgggatacattacaaactacaactattgtacagcaacggcgtc
agaacagaacaggatctttatgttcggttaatcgattccatgacaaaacaggctattatt
tatgaagggcaagacaaaaacccagaaatgtgccgagttcttctcacacacgaaattatg
tgcagtcggtgttgtgacaaaaaaagctgcgggaacaggaacgaaacgccctcggacccc
gtgatcatcgacagattctttttgaaattcttcctcaagtgtaatcagaactgcctgaag
aatgcaggaaacccacgggacatgcgcagattccaggtcgttgtatcgacaacggttaat
gtggacggtcacgtgttggccgtgtcggacaacatgttcgtccacaacaactcaaaacac
ggcagaagagcccgccgccttgacccctcagaaggtacggccactccttatctggagaat
gcagctaccccgtgcataaaggccattagccccagtgaaggctggaccactggaggagcc
acggtcatcatcattggcgataacttcttcgatggactgcaggtcgtgtttggcaccatg
ctagtatggagtgagctcattacgccccatgccatccgagtgcagacccctccaagacac
atccctggcgtcgtagaggtcaccttgtcctacaagtccaagcagttctgcaaaggtgca
ccggggcgatttgtgtatacagctttgaacgaaccaaccattgactacggcttccagaga
ctgcagaaggtcattcccagacatccaggtgatccggagaggttgcccaaggaggtgttg
ctaaagagagccgctgaccttgtggaagcgctgtacgggatgccacacaacaaccaggaa
atcatcctgaagagggccgcagatatcgcagaggctctgtacagcgtcccacgtaaccac
aaccagatcccgtctctcgccaacacggcttctcacggcggaatgatgggagtcaactct
ttcggcggtcagcttgccgtcaacgtctcagagacctcacaagtgggctacagtcgcaac
acgagcagcgtgtcgcctcgcggttacgtgcccagcagcaccccgcagcagtccaactac
aacaccgtcagcaacagcatgaacggctacggcaacgcgggaatgcccaacctgggcgtg
cccagctcaccgggcttcttgaacggctcctcggcaaactctccctacggcagtaagtat
caagtagttccgtcgagccctaccatggcagcctcttcggtcagcctctcttcaaactgt
agcagtacacacggcattttctcattctcacctgccaatgtcatctctgcagtgaaacaa
aaaagcgcctttgctccagttgtcaggccccaagcatctccacctccttcttgcaccagt
gcaaatggcaatggacttcaagctatgtccggactggtggtcccacccatgtaa
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