Labeo rohita (rohu): 127173872
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Entry
127173872 CDS
T09007
Symbol
itgb3b
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-3b
KO
K06493
integrin beta 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03266
Virion - Herpesvirus
lroh04145
Phagosome
lroh04148
Efferocytosis
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127173872 (itgb3b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127173872 (itgb3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127173872 (itgb3b)
04148 Efferocytosis
127173872 (itgb3b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127173872 (itgb3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127173872 (itgb3b)
04810 Regulation of actin cytoskeleton
127173872 (itgb3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127173872 (itgb3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127173872 (itgb3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127173872 (itgb3b)
04515 Cell adhesion molecules [BR:
lroh04515
]
127173872 (itgb3b)
04090 CD molecules [BR:
lroh04090
]
127173872 (itgb3b)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127173872 (itgb3b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127173872 (itgb3b)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127173872 (itgb3b)
CD molecules [BR:
lroh04090
]
Proteins
127173872 (itgb3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
127173872
NCBI-ProteinID:
XP_050979887
LinkDB
All DBs
Position
12:complement(13954080..13971063)
Genome browser
AA seq
790 aa
AA seq
DB search
MEKTSPKLFSLWIYCVIVFLSDAGLGSNICTSRGASTCQQCLAVHPTCAWCFQEDFGQDV
PGSSRCDLKKNLIEAGCRRGALEYPTSKTHVTKNNDLSDKASGSTTDVTQIQPQSMQISL
RPDDSQVFTLKVRQVEDYPVDLYYLMDLSYSMNDDLSQLRQLGRGLAEEMSKTTSNLRMG
FGAFVDKPVSPYMYISPQQAVLNPCYSIPYKCQPQFGYRHVLSLTEEVSRFTEEVKKQKV
SRNRDAPEGGFDAIIQAAVCKEKIGWRPDASHLLVFTTDAKTHVALDGRLAGIVRPNDGQ
CYVGADNVYNMSTTMDYPSLALLTEKMSENNINLIFAVTSHVESLYKNYSELIPGTAVGT
LSEDSHNVIQLIQDAYAKLRSKVELELLNVPEELSLTFNATCLNGEVIPGLRSCSGLKRG
DTVSFSVEARARGCPKEKRKTFTIKPVGFKDTLQITVNFECECKCQAKAEPDSDVCHHGN
GTYECGICLCNPGRLGPRCECAEGDYSPTEQDACTGPDKVVCSGRGDCVCGQCVCHNNDF
GKVWGKRCECDDFSCLRYKGELCSGHGTCSCGFCQCDPDWRGENCNCSTRTDTCMSSLGL
LCSGRGQCVCGSCECTQPGAYGSTCDKCPTCPDACTLKKDCVECKHFKRGKLFDDNTCTQ
ICRDEIRLVDDLVFHDKNAVNCTYKDEDDCVQRFQYYEDNSGKSILSLVKEPDCPKGPDI
LVVLLSVAGAILLLGLAALLIWKLLITIHDRREFAKFEEERARAKWETGHNPLYKGATST
FTNITYRGKD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacttcacccaaactcttcagtttatggatttattgtgttattgtattccta
agtgatgctggactaggctccaacatctgtacttctcgaggagccagcacatgtcagcaa
tgcctggcagtgcatccaacctgtgcctggtgctttcaagaggattttggacaagatgta
cctggttcctcccgatgtgacctgaagaagaacctcatagaggcaggatgcagaagagga
gctctggagtatcccaccagcaaaacgcatgtgaccaagaacaatgatctcagtgataaa
gcctcaggatcgaccaccgacgtcacccagatccaacctcagagcatgcaaatctctctg
agacccgatgattcccaggtcttcacgctgaaagtccgtcaggttgaggactatcctgtg
gacttgtattatctaatggacctgtcctattccatgaatgacgacctgtctcagctgcga
cagctggggcgaggcctggctgaagagatgagtaaaaccaccagcaatctacgtatgggc
tttggggctttcgtggataaacccgtgtccccgtacatgtacatctcacctcaacaagct
gtgttaaatccctgttactcgatcccatataaatgccaacctcagtttggctacagacac
gttctgtctctgacagaggaggtgagccgctttacagaggaagtgaagaaacagaaggtg
tctcggaacagggacgccccagagggaggttttgacgctattatacaggcagctgtctgc
aaggagaaaattggttggagaccagatgcatctcacttactggttttcacaacagatgcc
aagacacacgtggcactcgatgggcgcctggcgggcattgtacgacccaatgatggccaa
tgttatgtgggcgcagataatgtctacaatatgtctacgactatggactacccatccctg
gcattactcacagagaaaatgtcagagaacaatataaatctcatttttgccgtgactagc
catgtggaatcactctacaagaactacagtgagctgatccctggcactgcagtgggcacg
ctgtccgaggactctcataatgtcatccagctgatccaggacgcatatgctaaactgcgt
tctaaggttgagctggagctcttgaatgtcccggaagagctcagcctgacatttaatgcc
acgtgtctcaatggggaggtcatccctgggctcagatcctgctctggcctcaaaagaggc
gatactgtgtccttcagtgtagaagctcgagccagaggctgtcctaaagagaagcgtaag
accttcaccatcaaaccggtgggcttcaaagacaccttgcagatcacagtcaactttgag
tgtgagtgtaaatgccaagctaaggcggagcccgatagtgacgtctgtcatcacggcaat
ggcacctacgaatgtggaatctgcctgtgcaacccgggacgactgggtcccaggtgtgag
tgtgcagagggggactacagccccactgaacaggatgcctgcaccgggccagacaaggtg
gtctgcagcggccgtggagactgtgtgtgcggccagtgcgtgtgccacaataatgatttc
ggcaaggtgtgggggaagaggtgtgagtgtgacgatttcagctgcctgcggtacaaagga
gagctctgctcaggtcatggcacttgttcctgtgggttttgccagtgtgatccagactgg
aggggggagaactgcaactgttctactcgtacagacacctgtatgtccagtttggggctg
ttgtgcagcggtcgtggtcagtgtgtgtgtgggagctgtgaatgcactcagcctggggcc
tatggttccacctgtgacaaatgtcctacctgccctgacgcctgtaccttaaaaaaggac
tgtgtagagtgtaagcattttaagagagggaaacttttcgacgacaacacctgcactcaa
atctgcagagatgaaatcagactggtggatgatttggtgttccatgataagaatgcagtg
aactgcacctataaggatgaggatgactgtgtgcaaaggtttcagtactatgaggacaac
agtggcaaatccattttgtctctggtcaaagagccagactgccctaaaggccctgatatc
ttggtggtgctcctgtcagtagctggtgccattctgttattggggttggctgccctgctt
atctggaaactgcttatcaccatccacgatcggcgtgaatttgctaagtttgaggaggag
cgggcacgtgccaagtgggaaacgggccacaaccccctctacaaaggtgccacatcaaca
ttcacaaacatcacatatcgaggcaaggactga
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integrated database retrieval system
