Labeo rohita (rohu): 127173876
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Entry
127173876 CDS
T09007
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127173876 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127173876 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127173876 (ldb3b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
127173876
NCBI-ProteinID:
XP_050979892
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All DBs
Position
12:14215534..14237861
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AA seq
311 aa
AA seq
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MSNYTVTLSGPAPWGFRLQGGKDFNMPLTISRITPGSKASSGNLNQGDIITAIDGVSTEG
MTHLEAQNKIKAATTKLNLTMQRSRRPAPVPTATPRMDSPMPIIPHQKETTDTEEGEDEE
KPVKKYGILLARKPSKKSLIPNTEENPQENLQPVIHSPAKSPVPTFLPFGQGPKTTPNQR
IQYNSPIGLYSAETLREMVMQQDSLNGLPCLGSLPIKDPLVDSASPVYQAVIKPDNKEME
MSDWARRAANLQSKSFRILAHITGTEYLQDPDEEALRKSREKFESEVKGPRFAKLKNWHH
GLSAQILNIQG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacagtaaccctgtctggacctgcaccatggggcttcaggctgcaggga
ggcaaagacttcaacatgcccctgaccatctcccggatcacaccaggcagcaaggcatca
agtggaaacctcaatcagggtgacataattacagcaatcgatggggtcagcactgagggc
atgacccatctggaagcccaaaacaagataaaggcagccaccaccaaactcaacctcacc
atgcagaggtcgagacgtcccgctcctgtacccacagccactccaagaatggactcaccc
atgccaattatccctcaccagaaggaaaccacagacactgaggaaggagaagatgaagag
aaacctgttaaaaaatatggcatcctcttggccagaaagccttccaaaaaatctctaatt
ccaaacactgaggagaatcctcaggagaatctccaacctgtaattcattctcctgctaaa
agccctgtccctacttttctgccatttgggcaagggccaaaaaccaccccaaaccagaga
atacagtataattctcccataggcttgtattcagcagaaactttaagggaaatggtcatg
caacaagacagtctaaatggcctgccatgtttgggctcacttcctattaaagaccctctt
gtggacagtgcttctccagtctaccaggctgtgatcaaacctgacaataaagagatggag
atgtcagattgggcccgtcgtgccgcgaacctgcagtccaagtccttccgcatccttgct
catatcacaggaacggagtatttgcaagatccagatgaggaggctcttagaaaatcaagg
gagaagtttgagtcagaggtaaaaggcccacgatttgccaaactgaaaaactggcatcac
ggcctgtctgcacagatccttaacatccaggggtaa
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