Labeo rohita (rohu): 127173940
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Entry
127173940 CDS
T09007
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b isoform X1
KO
K06482
integrin alpha 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127173940 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127173940 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127173940 (itga3b)
04810 Regulation of actin cytoskeleton
127173940 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127173940 (itga3b)
04515 Cell adhesion molecules [BR:
lroh04515
]
127173940 (itga3b)
04090 CD molecules [BR:
lroh04090
]
127173940 (itga3b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127173940 (itga3b)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127173940 (itga3b)
CD molecules [BR:
lroh04090
]
Proteins
127173940 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Collectrin
Motif
Other DBs
NCBI-GeneID:
127173940
NCBI-ProteinID:
XP_050980000
LinkDB
All DBs
Position
12:26247050..26298891
Genome browser
AA seq
1064 aa
AA seq
DB search
MAGKSLHLCVFVICAIQTNTGFNIDVQFPVIKEGKTKGSLFGFSVALHKQTERAKNNLLL
VGAPQEKAQPQLSKLNINETGAVYYCPITLDQHDCIRMDLISPPHSTEMVEGMWLGVTVA
SQRNGGRVLACGHRYVKKLLGAEEQQRMVGKCYVRGNDLTYDPADYWQSDTYELCDFNFD
QTLEGMCNMGISGGMTENDVYFGTPGSFVWQGTVHMKERDPNSDFAGDANEISFGKLGED
RLNIYIGYSVLEDIKLLDRSKYTVVTGAPRDNFKGSVILAEKQDLVLNPVLTLPGEQIGS
YFGSCLAVTDLNNDDWNDLIVGAPFYFDRYKEEGGAVYIFMNENGSFQEKASLVLKGKKG
SGFGFAVAAVGDVNQDGFQDFAVGAPFDDSGKVFIWMGSKNGISKEPSQVIEGKSLGSSA
FQTFGYSLSGGMDMDGNDYPDILVGSMDDRIALLRARPVIHLSKNFTVEPKIVIPSQCGN
SCIKVKVCFSYTLSNGNKAFKKDITVKYTVDADHNRRGARVRFLDNKQSTFTGLLSFSAP
ACQELELTVITPVRDKLQPIAFTLNVSLNEQKAAAQKTLQSLDTFPVLSGQQILTDKTEI
NFHKECGDDNRCSSNLQLKATFADENDIPFPSQTMEFNSNIKKLVMMVDVTNMPDEGRPA
EDAHQAMLNISIPPSLKYSGVRRQLGFDIECTANETVICDLGNPFKSNQKVSFKIIFETS
GITLYTEQIESQLQLSTISEQKDLFPVPVSLNVKNTVLTTFSLEKPVIDTSFSGSVIGES
AMNSTSDVGSPLEFVFHVHVLGEPLGNLGTLMIDFEWPYEVANGKWLLYLTEIVIKGVSE
SRCVPPGKIVNPLNLTLSDRGTKRSKRDVDIPGSGYPIAEASVTVLAPRKVSHLLECSKQ
TARCVTFSCPLHNMSTQAEIRVRSRVWNGTLLEDYANALRVEVRGQATLRLLTDKPAIKM
DNQAREFSVNIDPVLGEETPYEVPLWIIIVAAVAGILLLGIISLILWKCGFFKRAVYYRL
MPKYHGVKVRREERYKYNLAFQPEQELSKKLWVTNWTEMQEYYY
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaagtctctgcacttgtgcgtattcgtaatttgcgcgattcaaacgaacact
ggatttaacattgacgtgcagttcccggtcatcaaagaaggaaaaaccaagggcagttta
tttggattttcagttgcactgcacaaacagaccgaaagggcgaagaataacttgctcttg
gtcggagcgccccaagaaaaagcccagccccaactcagcaaactcaacattaatgaaacc
ggagccgtgtattactgtcccatcactctcgaccagcatgactgcattaggatggacctc
atcagtccaccacattctacagagatggtggagggcatgtggctgggagtaactgtggcc
agccagaggaacggaggacgtgtgctggcatgtggtcatcgctacgtaaagaaactcctg
ggtgctgaagagcagcagcgtatggtgggcaaatgctacgtgcggggcaacgatctgacc
tacgaccctgctgattactggcagtctgacacttatgagctctgcgacttcaactttgac
cagaccctggagggcatgtgtaacatgggcatctcggggggcatgacggagaacgacgtg
tactttgggacgcctggcagcttcgtgtggcagggaactgtccatatgaaagagagagac
cccaactctgattttgctggcgatgccaatgaaataagcttcggtaagctaggcgaggac
agactcaacatctacataggttactctgtgctggaggacataaagttactggatcgctct
aagtacactgtggtgaccggagctcccagagacaatttcaaaggttcagtgatcctggca
gaaaaacaagatttggttctaaacccagtgctgacgctcccaggggaacagataggttca
tacttcggcagctgcttggcagtgacggacctcaacaatgacgactggaacgacctgatc
gttggagctccgttttactttgaccgctacaaagaggagggaggagctgtttacattttc
atgaatgagaacggatccttccaggaaaaagccagcttggttctgaagggcaaaaaaggc
tcagggtttggatttgctgttgctgcagttggggacgtcaatcaggacggatttcaagat
tttgctgttggtgctccattcgatgactctgggaaagtctttatatggatgggaagcaaa
aatggaatatctaaggaacccagccaggtgattgaggggaaatcattaggttccagtgcc
ttccagacatttggctattctctcagtggaggaatggatatggatgggaatgattatcct
gacattttggtgggctccatggacgaccgcatcgctctcttgagagctcgtccagtcatc
catctttccaaaaactttacagtagagccaaagattgtgattccaagccagtgtggtaat
tcctgtataaaggtgaaggtgtgtttcagctataccctcagcaatggaaacaaagccttc
aagaaggacatcactgtgaagtacacagtagatgctgaccacaatcgccgtggcgcccga
gtccgtttccttgacaacaagcaaagcacatttacaggcctgctgtctttctctgcaccc
gcatgtcaagagctggaactaactgttattactcctgtgagggacaaactccagcccata
gcgttcactctgaacgtgtctctaaacgagcagaaagcagcagcacagaaaacgctccag
agtctggacacttttcctgtgctgagtggccagcagatcctgaccgacaaaaccgagatt
aactttcataaggagtgtggtgatgacaacaggtgtagcagtaacctgcagctcaaggcc
acgtttgctgatgagaatgacattcccttccccagtcagactatggagtttaacagtaac
attaagaagctggtgatgatggtggatgttactaacatgccggatgaaggcaggccggcc
gaggacgcccatcaggccatgctgaacatcagcattcccccctcactcaaatactcagga
gtgcgccgtcagcttggtttcgatattgagtgcactgcaaacgagactgtgatatgcgat
ctgggtaacccatttaaaagcaatcagaaggtctcattcaaaatcatctttgagacttct
ggtataacactttacacagagcagattgaatctcagcttcagctctccactatcagtgaa
cagaaggatctgtttcctgttcctgtctccctcaatgtgaagaacacagtccttactacc
ttctccctagaaaaacctgtgattgacacgtcgttcagtggcagtgtgattggtgaatct
gctatgaacagcaccagtgatgtggggagtccgctggagtttgttttccatgtgcacgtg
ctgggagaacctctgggaaatttgggaactctgatgattgactttgaatggccatatgag
gtagccaatgggaaatggctgctgtatctcacagagatagtgatcaaaggagtgtcagag
tcacgctgcgtcccaccggggaagattgtcaaccctctcaacctcacactgtcagatcga
ggtaccaaacggtccaaaagagatgtggatatcccaggatcaggatatcccattgcagaa
gcttctgtcaccgtcctggcacctcgtaaggtgtcccatttgctggagtgttcaaagcaa
acagctcgctgtgtgaccttctcctgcccgttgcacaacatgtcgactcaagcggagatc
agagtcaggtcacgcgtgtggaacggcaccttgctggaggattacgccaatgccttgcga
gtggaagtcaggggtcaggccacgctgagactgctgacggataaaccggccatcaaaatg
gacaaccaggctagagagttttcagtaaacattgatcctgtgctgggagaggagacgccg
tatgaagttcctctatggatcatcattgttgcagcggttgcagggatactgttgttaggc
atcatcagtctcattctgtggaagtgtggtttcttcaaaagggccgtttactacaggtta
atgccaaagtaccacggtgtgaaagtacgcagagaggaacgctataagtataacttggcc
tttcagcctgagcaagaactgagcaagaaactctgggtcaccaactggacagaaatgcag
gaatattactactga
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integrated database retrieval system
