KEGG   Labeo rohita (rohu): 127174016
Entry
127174016         CDS       T09007                                 
Symbol
chmp6b
Name
(RefSeq) charged multivesicular body protein 6
  KO
K12195  charged multivesicular body protein 6
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03250  Viral life cycle - HIV-1
lroh04144  Endocytosis
lroh04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127174016 (chmp6b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127174016 (chmp6b)
  09143 Cell growth and death
   04217 Necroptosis
    127174016 (chmp6b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127174016 (chmp6b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127174016 (chmp6b)
Membrane trafficking [BR:lroh04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    127174016 (chmp6b)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127174016 (chmp6b)
  Exosomal proteins of other body fluids (saliva and urine)
   127174016 (chmp6b)
SSDB
Motif
Pfam: Snf7 SpoVR
Other DBs
NCBI-GeneID: 127174016
NCBI-ProteinID: XP_050980160
LinkDB
Position
12:complement(8103637..8108887)
AA seq 206 aa
MGNLFGKKKATRVTEQDKAVLQLKQQRDKLKQYQKKITLQMEKERQLAKQLLKDGKKEKA
LLLLKKKRYQDQLLDKTENQISNLERMVQDIEFSQIEMKVIEGLKVGNDCLKKMHEVLSI
EEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITQGDADLELPEVPEEEL
PEVPEQEPVREKEKVKKNPEREMLAL
NT seq 621 nt   +upstreamnt  +downstreamnt
atgggaaatcttttcgggaaaaagaaagcaactcgggtgaccgagcaggacaaagctgtg
ctgcaactgaagcagcagagagataaactcaagcagtatcagaagaagattacgcttcag
atggagaaagagcgacagctggccaagcagttattgaaagatggaaagaaagagaaagca
ctcctactccttaagaagaaacgctaccaggatcagttactggataaaactgaaaatcaa
ataagcaacttggagcgaatggttcaagatattgaattttcacaaatagaaatgaaagtc
attgaaggactgaaagttggcaatgattgcctgaagaaaatgcatgaggtgctgtccata
gaggaggtggaaaagatcatggatgaaacgcatgatgccattgagtatcaaaagcaaatt
gatgagatgctggcgggatctctgacccaggaggatgaggaagctgtactagcagagctg
gaagccatcactcagggagacgctgaccttgaacttcctgaggtgcctgaagaagaacta
ccagaggttccagagcaagagccagtgcgggagaaggagaaggtaaaaaagaatccagag
agagagatgctggcactgtaa

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