Labeo rohita (rohu): 127174037
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Entry
127174037 CDS
T09007
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174037 (zeb1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
127174037 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-met
zf-C2H2_15
DUF6801
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
127174037
NCBI-ProteinID:
XP_050980190
LinkDB
All DBs
Position
12:13681283..13761594
Genome browser
AA seq
1074 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGTVDPDGRWDDVKEECVSDEDERSRDALVEEMLQQGDTAVIFPEAPEDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGIFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNVLKVAVDGNVIRQVLEKGQQAGTGIVGAGGVGIAQAPQQV
IQAISLPILDQDGSAKIFINYSLDPSQAQAVLQSPKKEPLGLNTEACKSQKLPEDLTVKT
NRDKTTNTVDEKSILHNDTTLKHCGKDGHKRVNGKNLEGKIDLEEGLCPGQPPLKNLLSL
LKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISVDPSSPPAEDEQTTPGD
SDGTRDVESDKQINSEEQGDRECCSPAEGVAAGENGIESVPTSPSPLNLSADGPVPARTL
EEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKKELLSNPSTNAAIFASQP
SANPINIVTTQLPTLVAITDQGQAQCLRALTTTKQTILIPQLTYSYTTTSSSPAGNDTPQ
KNVIHVNGIKEEKQEMGSEVTSALEEQTDSDSGPTRKKMKRTESGLYACDLCDKIFQKSS
SLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHSGSYSQ
HMNHRYSYCKKEAQGQGLGQGVEEEDNPGEEQPRTGSTATSPPSHLDSDERGSSTREDES
EEDEEMGSGSLVDEDEIQVVKIGEEGDEDDQGADEDREEERMEQEDGDEEGESEENDGQT
LKVVVMQDECEDENGEDERTAEEAMDMGTVEKMKDTTETIESEENTAAMNGDVK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactacagtcatgtgctggagggccagtcagactcagatgatgaggataagcttcac
atcgtggaggaggaagggagtctcctggacggggctgactgtgacagtgtggcccctgac
gatgaccctaacgggaccgtcgaccccgacggcagatgggacgatgtgaaagaggagtgc
gtgtcggacgaggacgaaaggagcagagatgctttggttgaggagatgctccagcaagga
gacacggccgtcatcttcccggaggctccggaagatgaaccacgacagggcacgccagaa
accagcggacatgatgaaaatggcacgccagactcattttctcagctcctcacctgtccc
tattgctctcgtggctacaagcgttacacctcactgaaggaacacattaaatacagacac
gagaagagtgaggacaacttcagctgctccctctgcagctacacctttgcctaccgaaca
cagctagacagacacatgaccgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttacgagtgctcc
aactgcaagaagcgtttctctcattccggctcttacagttcccacatcagcagtaagaaa
tgcatcggcctcatctcagtaaacgggcggccgcgaccttctcccgccaccggggctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccccacggcacgtgtccaa
gtcagagacaaactggacaatagcaaaccccttcaggaacagcttcccttgacacagatc
aagtccgagccactggactacgagtacaagcctgtggtggtggccccatctgctagaggc
gtaaatggcattttccagggtggggcggcagcccctcttcagggcgccgtacaggctgtt
gttctcccaacggtgggcctggtatcgccaatcagcatcaacctgggagacttacagaac
gtgctgaaggtggcagtggatgggaacgtcatcaggcaagtgctggaaaaggggcagcaa
gcggggacgggaattgttggagcaggaggggtgggaattgcccaagcaccccagcaagtc
atacaggccattagtcttcccatcttggatcaggatggtagtgctaagatcttcatcaat
tacagtctagacccttcacaggcccaggcagtccttcaaagtccgaagaaggaacctttg
ggcttgaacacagaagcctgcaagtctcaaaagctgccagaggacctgacggtcaagacg
aatagggacaaaaccaccaacactgtggacgagaaaagtattttacacaatgacacaaca
cttaagcactgtggtaaagatggacataaaagggtaaacgggaaaaaccttgaggggaag
atagacttggaggaaggactgtgtcctggtcagcctccgctgaagaaccttctctccttg
ctcaaggcttacttcgccttaaacaatgagcccactaaggaggagctggcaaagatatcc
gagtcggtcagtcttccggcagaggtggtgaagaagtggtttgagaagatgcaattggga
cagatctctgtagatccctcctcacccccggctgaggatgagcagaccactcctggtgat
tcagatgggactagagatgtagagtcggataagcaaattaactcagaggagcaaggagac
agggaatgctgtagcccagctgagggcgtagcagctggggagaacgggatcgagagcgtt
cctacatccccttcaccactaaacctatcggctgacggccctgtcccagccaggactctc
gaggaaggcgagggacctctcgatctgtcgctaccaaaatctgctgctacagctgctgtg
gctagcggtcacgtaaacactgtttactcggctcaagaggagccgctgaatttgacttgc
acaaagaaggaactgctcagcaatccaagcaccaatgctgccatatttgccagccaacca
agtgccaatcccataaacatcgtgaccactcaactgcccacccttgtggctatcactgac
cagggacaagcgcaatgtcttcgtgcacttaccaccactaaacagaccatcctgatcccg
cagctgacttacagttacaccactacatcctccagcccagcagggaacgacacaccgcag
aaaaacgttatacacgtcaatggcatcaaggaggagaaacaggagatgggatcagaggtc
acctcagcattggaagaacagacagattcagactcagggccgacaagaaagaagatgaaa
aggacggagagtgggctgtacgcctgtgacctgtgtgacaaaatcttccagaagagcagt
tcactgctccgccataaatacgaacacacaggaaagaggcctcatgaatgtgggatctgc
agcaaggccttcaaacacaagcaccacctaatagagcacctgcgcctgcactccggagaa
aagccgtaccagtgcgacaagtgcggcaagcgcttctcccactctggctcctactcgcaa
cacatgaaccaccgatactcctactgtaagaaagaggctcaaggtcaagggctaggccag
ggagttgaggaagaggacaatcctggcgaggagcagcctcggacgggcagcacagcgacc
tcgcccccttcccacctggactcggacgagcgggggagtagtaccagagaggacgagagc
gaggaagacgaggagatgggctcggggagcctagtggacgaggatgagattcaggtggtc
aagattggagaggagggagatgaagacgaccagggagcagatgaagaccgggaagaagag
cggatggaacaagaagatggcgacgaggaaggcgagagcgaagaaaatgacggacagacg
ctgaaagttgtagtgatgcaggatgaatgtgaagacgaaaacggagaggacgagcgaacg
gcagaggaggccatggacatgggaactgtagaaaaaatgaaggacacgacagaaacaatc
gaaagtgaagaaaacacagccgcaatgaatggagatgtgaagtga
DBGET
integrated database retrieval system
