Labeo rohita (rohu): 127174051
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Entry
127174051 CDS
T09007
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127174051 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127174051 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lroh00535
]
127174051 (chad)
Proteoglycans [BR:
lroh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
127174051 (chad)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
A-2_8-polyST
Chorein_N
Motif
Other DBs
NCBI-GeneID:
127174051
NCBI-ProteinID:
XP_050980221
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Position
12:complement(13914260..13921800)
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AA seq
363 aa
AA seq
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MYSFSFLLVLACLQVCVPFVFGAPTQCPSQCHCHGDLQHVICDSVGLKKIPRISEATRLL
NMQRNNLGNLPTGGFSEMKGLISLHLQHCQIREVASQAFKGLKKLIYLYLSNNEISTIKP
GAFDDLTELTYLYLDGNQITSLSKGIFSPMINLFILQLDDNKLRELQPGTFTGTSDLRWL
YMSGNELSSIQPGSLDEVENLAILTLDRNKLSTYPLMAISKLRVVEELNLSKNPLTLIPD
HAFRSFGRYMEKLHLNDMGLEKFSTAAFEGVTALKSLHLENNKLKSLPSSLEFGTLQNIT
LFNNPWSCNCQIANLRKWMDTSRHRPDAVCASPGSQKGKQIRDSSAFTRCKAKMNRARKG
TRL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtttcagcttcctactggtgctagcgtgtctacaggtctgcgtcccctttgtg
tttggtgcaccaactcaatgtccaagccagtgccattgccatggggacctacaacatgtt
atttgtgacagcgtcgggctgaagaagatcccccgcatatccgaggccactcgtctcctg
aacatgcaacgcaacaacctggggaatctcccaactgggggcttcagcgaaatgaagggg
cttatttctctgcacctgcagcactgtcagatccgagaggtggccagccaggctttcaaa
gggctgaagaagctcatctacctctatttgtctaacaatgagatcagcaccatcaaacca
ggagcttttgacgacctgaccgaactgacttatctctacttggatggtaaccaaattaca
agcctttcaaaaggcatcttttctccaatgatcaacctgtttatcctgcagcttgatgac
aacaagcttcgagagctgcagcctggtactttcacaggtactagtgatctccgatggctt
tatatgagtggcaatgagttgagctccatacagccaggttctttggatgaagtggagaac
ctggccattttaactctggaccgtaacaagctgtccacctaccctctcatggctataagc
aagctgcgtgtcgtagaggaactcaacctgtccaaaaaccctctcaccctgattcctgac
cacgctttccggagctttgggcgctatatggagaaactgcatctaaatgacatgggcctg
gagaagttctccactgctgcctttgagggagtgacggctctcaaatctctgcaccttgaa
aacaacaagctaaaatcactgccgagcagccttgagttcggcacccttcagaacatcact
ctgtttaacaacccctggtcctgcaactgccagatagcaaacctcagaaaatggatggac
actagccgtcatcgccctgatgcagtttgtgcttctcccggaagccagaaaggaaagcaa
ataagagacagctctgctttcacccgctgcaaggcaaagatgaatagggccaggaaggga
acacggctttga
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