Labeo rohita (rohu): 127174094
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Entry
127174094 CDS
T09007
Name
(RefSeq) guanylate-binding protein 2-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127174094
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Pox_A11
Motif
Other DBs
NCBI-GeneID:
127174094
NCBI-ProteinID:
XP_050980294
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Position
2:complement(29865577..29873513)
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AA seq
621 aa
AA seq
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MSKTRLMPSPVCLVENVNGSLNVNKDALEFLSGINEPVVVVSVVGLYRTGKSYLMNRLAG
QQTGFALGNTIESKTKGIWMWCVPHPNKDGHTLVLLDTEGLGDVDKGDSKNDSWIFCLAV
LLSSTLVYNSRGTIDNNALENLHYVTELSEQIKIRSPLSAPKGAAEEVEDCQFVRFFPSF
IWVVRDFTLKLVTDGKKVTEDEYLEFALDLKKGVNKKISDYNLPRQCIRNYFPSRNCFVF
PSPASSENMIHLENLKEHELVPDFLEVTGRFCDHIFHKSSVKTLKGGHSVTGKLLGHLVQ
IYVDTISSGEVPCLDNAVATLAFLENEAAVQKALKVYQSGTEEVKNKFPVSVIDITSEHQ
KFSNLAISEFMKHSFKDEKGEYLIKLMEAVGKCYVDLLQENEMASERKCRDLLKDLFSDM
KKRLQDGEYSQSGGYEVYCRDRDAIVEQYRREPNKGVSAEAMLNEFLKDQGPEAKSILYI
DTKLTENDKKIQEEKEKTALLEQRCKEEEEKRIERELMLQEERKQHADRMQQMQEKFKSE
MEQQQQEMDRALESKMMELGGLLNKGFKEKANLLEEEINNLKREKEEKGSGGLKDLMMVL
LSNMEKLLPLILEFRRKNSKP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaccagactaatgccttcacccgtatgcttggtggagaatgtgaacggatca
ctcaatgtcaataaggatgcccttgagttcctgagtgggatcaatgagccggtggtggtg
gtgtctgtggtgggactctatcgtacagggaagtcttaccttatgaaccgcctggcagga
caacagacaggctttgctcttggcaatactattgagtcgaagaccaaaggcatctggatg
tggtgtgtccctcaccccaataaagatggacacactctggtgctgctggacacggaggga
cttggtgacgtggacaaaggagactctaagaatgacagctggatcttctgtctggctgtt
ctgctcagcagcacattggtgtacaacagccgcggtaccatcgataacaatgcattggag
aatctacactacgttactgagctcagtgagcagattaagatcagatcaccattatctgca
ccaaaaggagcggctgaagaagtagaggattgtcagtttgtgcgatttttcccatcattc
atctgggttgtgagagatttcacattgaagttggtaactgatggaaagaaagtgacagaa
gatgagtaccttgagtttgccctcgatctgaagaaaggtgtgaataagaaaatcagcgac
tacaacctccctcgtcaatgcatccgaaactatttcccatcccggaactgttttgtattc
ccatctccagcctcatctgaaaacatgatacacttagaaaacttaaaagaacatgaactt
gtgccagattttctggaggtcacgggtcgtttctgtgaccacatctttcacaagagttct
gtgaaaacgctgaaaggaggacacagtgttactggcaaattgcttgggcatctggtgcag
atttatgtagatacaatcagcagtggtgaagtgccctgtctggacaatgcagttgctact
cttgcatttttagagaatgaggcagctgttcaaaaagctttaaaagtatatcagagtggg
acagaagaggtgaaaaacaaattcccagtaagtgtaattgacattacctcagagcaccag
aagttcagcaatctggccatctctgagttcatgaaacactcctttaaagatgaaaaagga
gaatacttaataaaactgatggaagctgtaggtaaatgctatgtagacctactgcaagaa
aatgagatggcatcagaaagaaagtgcagagatctgctgaaggatctgttctctgacatg
aaaaaacgtctgcaagatggagagtacagtcagtctggaggatatgaagtctactgcaga
gacagagacgccattgttgaacagtaccgcagagaacccaataaaggtgtatcggctgag
gccatgctgaatgagtttctgaaagaccagggacctgaagccaaaagcatcctctacatt
gatacaaaactcactgaaaatgacaaaaagattcaagaggagaaagagaagacggctttg
ctggaacagagatgtaaagaagaagaggagaaacgaattgagagagagctaatgttgcag
gaagagagaaaacagcatgcagacaggatgcagcagatgcaggagaagtttaaatcagag
atggaacagcagcagcaggagatggacagagctctggagagcaaaatgatggagttgggg
ggactgctaaataaaggctttaaagagaaagctaatcttcttgaggaagagataaacaat
ctaaaaagagaaaaggaagaaaaaggttctggtggtttaaaggatttgatgatggtactt
cttagcaatatggaaaaactccttcctctaatccttgagttcagaaggaagaacagcaaa
ccatag
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