Labeo rohita (rohu): 127174100
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Entry
127174100 CDS
T09007
Symbol
socs5a
Name
(RefSeq) suppressor of cytokine signaling 5a
KO
K04698
suppressor of cytokine signaling 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127174100 (socs5a)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
127174100 (socs5a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOCS
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
127174100
NCBI-ProteinID:
XP_050980297
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Position
12:14799386..14816438
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AA seq
528 aa
AA seq
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MEKVGKVWSNLKKGCQSLLHTDGGSRIETPPQLQPQTDTVCQSVDKAQGDSTLEAASTSS
SVAALPLVAWRTGGSVTRQGHNCVVDVPQILEITVEQDTEDARAPLGARRDSYSRHAPWS
GKKRHSCSTKAQSSLETTDRRSGRSRRRHGTGTSREELEPGAARSIRQQIHDTVGLCLPL
RSSSRNSHLPLPKRKIQITELMLETCPFAPGSDLARKWHLIKQHTAPVTVTPVDSSSDAC
GAACASPEDEEERLRERRRLSIEEGVDPPPDAQIHTVEAITAPLASLYKLGPKLAPGMGE
TLGDSRGATAANCDSEDDDTTTLCLQARRPKQRHASAEGLLSSKQPGPWKVHTQIDYIHC
LVPDLLQITALPCYWGVMDRYEAEALLDGRPEGTFLLRDSAQEDYLFSVSFRRYGRSLHA
RIEQWNHNFSFDAHDPCVFHAATVTALLEHYKDPSACMFFEPLLTVPLHRTFPFGLQSLA
RSAICNGITYDGIGALPLPPALQDYLREYHYKQRVRVRWLEREPVKAK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggttggcaaggtgtggagcaacctgaagaagggatgtcaatctctgctccac
acagatgggggttctcgcattgaaacgccaccacagcttcaaccgcaaacagacacggta
tgccagagtgtggacaaggcccagggagacagcacattggaggctgcaagtacatctagt
agtgtggcagcactccctctagtggcatggaggaccggtgggagtgtgacacgacagggc
cataactgtgtagtggatgtaccccagatactagagatcacagtcgagcaggatactgaa
gatgctcgtgctcctctgggagcccgcagagactcttattcacgtcatgcaccttggagt
ggaaagaagaggcactcatgttccactaaggctcagagttctctagagaccacagatcgg
cgatcaggccggtctcggcgcagacatgggactggtaccagccgtgaggagttggagcca
ggggcagcacgctcaatccggcagcagatccatgatacagtgggcctgtgcctcccgctg
cgctcatcctctcggaacagtcaccttccactacccaaacgtaagatacaaatcacagag
ttgatgctggagacgtgccccttcgcaccaggatcagaccttgcccgaaaatggcacctc
attaaacagcacaccgcaccagtcacagtgacaccagtagattcatcctcagatgcttgt
ggtgctgcctgtgcctcaccggaagatgaggaagagcgcttgcgagaaagaagacgactt
agcatcgaggaaggtgtggacccacctccagatgcccaaatccacacagtggaggccatc
acagctcctctggcttctctttataagctgggacccaagttggcccctggaatgggtgaa
accctaggcgatagccggggggcaacagcagcaaactgtgactctgaggacgatgatacc
accactctttgcttgcaagctcgcaggcccaagcagcgacacgcttcggctgagggtctc
ctgagcagcaagcagccaggtccttggaaagtacacactcagattgactacatccactgc
ttggttccagatctgttacagatcacagcacttccctgctactggggtgtgatggaccgt
tatgaggctgaagctctgctggatggtcggcccgagggtacctttctgctgcgggactct
gcgcaagaagactacctgttctccgttagcttccgccgctatggccgttcgctgcatgca
cgtattgagcagtggaatcacaacttcagctttgatgcgcacgacccttgcgtgttccac
gcagccacagtcacggcactcttggaacactacaaggatcctagcgcttgcatgttcttt
gagccgttgctcaccgtgcctctgcaccggaccttcccattcggcctgcaaagccttgct
cgatcagccatttgcaatgggatcacctacgatggcatcggggcactgccactgccccct
gctctgcaggactacctcagggagtatcactataagcagagggtgcgcgtacgctggctt
gagagggagccagtcaaggccaagtga
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