Labeo rohita (rohu): 127174150
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Entry
127174150 CDS
T09007
Symbol
tcf7l2
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04310
Wnt signaling pathway
lroh04520
Adherens junction
lroh04916
Melanogenesis
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127174150 (tcf7l2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127174150 (tcf7l2)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
127174150 (tcf7l2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127174150 (tcf7l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174150 (tcf7l2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
127174150 (tcf7l2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127174150
NCBI-ProteinID:
XP_050980396
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All DBs
Position
12:10843125..10935529
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AA seq
635 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENSSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSESFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVGPFCLEFPGQTDLSLHQLH
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQADVDPKTGIPRPPHPPDISPYY
PLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSSLLSSRFPPHMV
PPHHSLHTTGIPHPAIVTPNVKQESSHSDIGSLNSSKHQDAKKEEEKKKQPHIKKPLNAF
MLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW
SARDNYAGNYQGKKKKRKREKQAGEGNEHREYFPNPCLSLPPITDLSAPKKCRARFGLDQ
QNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLESPPSSPSMVSPSPSSKESKPQTEQ
MQPLSLTMKPPPLLSSSQHQHLSMAPPPPLALLDNSGAGKTSGSAHNGSLDPSDVSSSRP
TGSASSRPTSACHSHSLLPSSATTQPLSLVTKSID
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggcggtggaggggacgatctgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggcgagcaggaggaaaagatttcggagaactcctcagcagaaagggat
ttagcagatgtcaagtcttctctcgtaaacgagtcggaaacgaatcaaaacagctcttcg
gattcggaggcggaaagacggcctccgcctagatctgaaagtttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgattcccgacctcacgagcccgtacctcccgaacggatcg
ctctcaccgaccgcacgcacatatctacagatgaaatggcccctgctagatgttcaagca
ggaagtcttcagagtagacaagcacttaaagatgccaggtcaccttctccagcacacatc
gttgggcccttctgcttggaattccccggacagaccgatctgagtcttcaccaattacat
ttgtctaataaggtccccgtggtacagcaccctcaccatgtgcacccgctcacacctctg
atcacctacagcaatgagcacttcacgcctgggaacccccctccacatctacaggcagac
gtggaccccaaaacaggaatcccaaggcctccacatcctccagatatatccccctactac
cccctgtcacctggcactgtaggccagattccccatccgctaggatggttagtaccacag
caaggtcaaccagtttacccaatcacgacgggaggtttcagacacccctacccgactgcc
ctcactgtcaatgcgtccatgtcaagtcttctctcctccaggttccctcctcacatggtg
cccccccaccacagtttgcacaccacagggatcccccacccagccatcgtcacgcccaac
gtcaagcaggagtcctctcacagtgacatcggctccctcaacagctcgaaacatcaggat
gcgaaaaaagaggaggaaaagaagaagcagccacacataaagaaacctctgaacgcgttc
atgctttacatgaaggaaatgagagccaaagtggtggcagaatgcacactgaaagagagc
gcagctatcaaccagatcctaggccgaaggtggcatgctctgtctcgagaggagcaggcc
aaatactacgagctagccaggaaagaacgacagcttcacatgcagctgtaccccggctgg
tcggcacgagacaactatgcgggtaactatcaggggaaaaagaagaagagaaaaagggaa
aagcaggcaggagagggcaatgaacacagagaatattttccaaacccttgcctttcactc
cctccgattacagatctgagcgccccaaagaagtgtcgcgcacgcttcggcctcgaccag
cagaataactggtgtggcccatgcaggagaaaaaagaagtgcattcgctacattcaaggt
gaaggcagctgtgccagtcctccttcttcggacggaagcttactagagtcccccccatcc
tctccctccatggtctctccctccccgtcctcgaaagagtccaaaccacagactgaacaa
atgcaacctctctcactgactatgaaaccgccccccctgctctcgtcgtcccaacaccaa
cacctctccatggctccgcctccacccttagctctgttggacaactccggggcgggcaaa
acgtccggctcggcacacaacggctccttggacccctcagacgtgtcgtcgtcccgaccc
acaggctccgcctcctccaggcccacatcggcgtgtcattcccactctctgctacccagc
tccgccacgacgcaacccctttcgctcgtaaccaagtcgatagactag
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