Labeo rohita (rohu): 127174275
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Entry
127174275 CDS
T09007
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127174275
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Major cadherins
127174275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
ASFV_J13L
CLSTN_C
DUF443
Motif
Other DBs
NCBI-GeneID:
127174275
NCBI-ProteinID:
XP_050980593
LinkDB
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Position
12:complement(5294838..5486730)
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AA seq
803 aa
AA seq
DB search
MLRRNCLLLFLCFLFEQSFCAPFQSRPGQEWPHSQTGPSAAGRNGGSRGFQRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHTDLDKGESAVKYTLSGEGAGTIFTIDQITGDIHALRSLDR
EEKPYYTLRAQAVDIETNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPVGTYV
MKVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIRTALPNMDREVKELYQVLIQA
KDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSAVGSAVGRIKAHDLDIG
KNAEVEYNIVPGDGGAMFDITTNEHNQEGIIMLKKPLDYETKKAYTFKVEASNAHLDPRF
HNFGPFKDTATVKINVLDVDEPPVFSKPSYAMDVYEDTPQGTIIGAVTAQDLDAGNSPVR
YSIDWKSDLDSFFDIDPVRGTISTNELLDRESIAQHNISVVATKVNNPVLTSRVAVTVHV
LDINEFPPELAMPYETFVCESAKVGQVIQVITAKDQDLPQAGQRFSFKSPQEGVKTKNFT
IRDFGNNTAGVVTLRGGFKRRSQEIYHLPVVIEDGGLQTLSSTGTLTIRVCGCDTDGSLL
TCSAEAIFLPVGLSTGALIAILVCIVILLVIVVLYVGVRRQKKKETLMTSKEDIRDNVIH
YDDEGGGEEDTHAFDMGTLRNPKVIKENLFRRDVKPELGLCPRRPIASQNSADISNFISQ
RLQEHDGDTSAPPYDSLATYAYEGEGSVAESLSSIESVKGETEEDYDYLNEWGPRFKTLA
GIFGERSESQSDVTSSTTTENKH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaggaactgcctgctgctgttcctgtgcttcctctttgagcagagcttctgc
gctcccttccaaagcaggccagggcaagagtggccccatagtcagacggggccatcggcg
gcaggaaggaatggaggttccagaggattccagagggtcaagaggggctgggtgtggaac
cagttctttgtgcttgaggagtacatgggctcggacccacagtatgttggaaagttgcac
actgatttggataaaggggagagtgcagtgaaatacactctctcaggcgagggcgctgga
accatcttcaccattgaccagatcaccggggacatacacgctttacgtagtctggatcga
gaggagaagccttactatacgctacgagctcaagcggtggacatcgagaccaaccgaccg
ctggaaccagagtcagagtttgtcatcaaagtgcaggacatcaacgacaatgagccaaag
tttctagaagggccctacacggctagtgtacctgagatgtcacctgtgggtacatacgtg
atgaaggtgacggcgacagatgcagacgaccctacgtacggcaacagcgctagggtggtg
tacagcatacttcacggccagccgtacttctcagtggatcccaaaacaggagtcatcagg
acagctctacccaacatggaccgggaggtgaaggagctctatcaggtcctcatccaggct
aaagacatggggggacagttagggggtctggcagggaccaccaccatcaacatcactctg
agtgatgtcaacgacaacccacccaggttctccaaaagcatcttccacctgcgtgtaccg
gagtcatcagcagtcgggtcagcagttggccgaatcaaagctcacgatctggacattgga
aagaacgcggaggtggaatacaacatcgtccctggagatggaggagccatgtttgatatc
accaccaacgagcacaatcaggagggaatcataatgcttaaaaagccgttggactatgag
accaaaaaagcgtacacgtttaaagtggaggcctccaatgcacacctggatccacggttt
cacaatttcggcccattcaaagacacagctacagtgaagataaacgttctggatgtggat
gagcctcccgtcttcagtaaaccctcctacgcgatggatgtttatgaggacacaccacaa
ggcaccattataggagcagtgactgcacaggatctcgacgcaggaaacagtccagtcagg
tactccatcgactggaagagtgacctggacagcttcttcgacatcgatcctgtcagagga
accatctccaccaacgagcttctggacagggagagtatagcccagcacaacatttcagtc
gtggccactaaagttaataacccagtgctgaccagcagagtggccgtcacagttcatgtg
ctggacattaatgagtttccaccagagctggccatgccttacgagaccttcgtgtgtgag
agcgccaaagtcgggcaggtgattcaagtcatcactgcaaaagaccaggatcttcctcaa
gccggacaaagattttccttcaaatcccctcaagagggagtgaagaccaaaaacttcacc
atcagagactttggaaataacactgcaggtgtcgtgaccctgcgtggcggcttcaaacgg
cgctctcaggagatctaccatcttcctgtggtgattgaggacggtggcctccagactttg
agcagtaccggcaccctcaccatccgcgtgtgcggctgtgacaccgatggatctttatta
acgtgcagcgctgaagccattttcctcccagtgggcctcagtaccggagccctgatcgct
attctggtgtgcatcgtcatactgctggtgatcgtggttctctacgttggggttcggcgg
cagaagaagaaagagactctcatgacgtccaaagaggacatccgtgacaacgtcattcat
tacgacgacgaaggcgggggcgaggaggacacgcacgccttcgacatgggcaccctccgc
aaccccaaagtcatcaaggaaaatctgtttcgcagagacgtgaagccagagttgggtttg
tgtccacggcggccaatagcctcgcagaacagcgctgacatcagcaacttcatcagtcag
cggctgcaagagcacgacggtgacacttccgccccaccgtacgactcgctggccacgtac
gcctacgagggcgagggctcggtggccgaaagcttaagctctatagagtctgtaaagggt
gaaacggaggaggactacgattacctcaacgagtgggggcctcgcttcaaaaccctcgca
gggatattcggcgaacgatcagagagccaatcagatgtaacatccagcaccaccaccgaa
aacaaacactga
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