Labeo rohita (rohu): 127174298
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Entry
127174298 CDS
T09007
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127174298 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lroh04031
]
127174298 (rab40b)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
127174298 (rab40b)
GTP-binding proteins [BR:
lroh04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
127174298 (rab40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127174298
NCBI-ProteinID:
XP_050980627
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All DBs
Position
12:10238182..10254444
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AA seq
286 aa
AA seq
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MGHRADVKMNHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGIDYK
TTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEI
DEHAPGVPKILVGNRLHLAYKRQVTTEHAQAFAERLGVTFFEVSPLCNFNITESFTELAR
IVLMRHGMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLN
ARMMHGRSYSVIASSAKKRNGTKKSKIIYPPLSPSQNCARTSCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcgggctgatgtgaagatgaaccacaggagcagcccagcaaaagcttatgat
ttccttctgaaattcctgctggttggagacagtgatgttgggaaaggggaaatactggct
agtctacaggatgggtccagtgagtcaccctatggatacaatatgggaatcgactacaag
acaactaccatactgcttgatggacgcagagtcaagctccagctttgggacacctcagga
caaggccgattctgcaccatattccgctcatattccagaggagcacagggtgttatcctt
gtatatgacattacaaaccggtggtcattcgatggcattgacagatggattaaagagatc
gatgagcatgcaccgggtgttcccaagatcctggtgggaaacaggcttcacctggcctat
aagcgtcaggtgaccaccgagcacgcccaggcttttgcagagcgactgggcgtcacattc
ttcgaggtcagccctctctgtaacttcaacattactgagtctttcactgagctggcccga
attgtgcttatgaggcatggtatggaacgactttggagacccaataaagtgttgagtctg
caggacctgtgctgtcgctctatcgtttcctgcactccagtgcaccttgtggacaaactt
ccccttcctgttgccttaaagagccatctgaagtccttctccatggccaacggcctgaac
gccaggatgatgcatggccgttcctactcggtcatagccagcagcgctaaaaaaaggaac
ggaaccaaaaagtccaaaatcatctacccgccactgagcccatcccagaactgcgcacgg
acgagctgcaagatttcatag
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