Labeo rohita (rohu): 127174332
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Entry
127174332 CDS
T09007
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127174332 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127174332 (gspt1)
03012 Translation factors [BR:
lroh03012
]
127174332 (gspt1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127174332 (gspt1)
Translation factors [BR:
lroh03012
]
Eukaryotic type
Release factors
127174332 (gspt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127174332
NCBI-ProteinID:
XP_050980681
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All DBs
Position
12:18077597..18090641
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AA seq
564 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENATSDGTDAV
ASMEISEPVAAVENGETDASAVETWEQKGEPDEEEPGGGSPADTGFCGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLVVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSELCPWYTGLPFIPHLDSLPNFN
RSSDGPIRLPIVDKYKDMGTVVLGKLESGSIMKAQQLIMMPNRHTVEVLSLLSDDVETEY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtccgcctttaccgggctcaacgtgaacgctccggaattcgta
ccgtcctttctttcccggggtccaccggaaaacgccacatctgatggcactgatgcagtg
gccagcatggagatctcagaaccagtggctgccgttgagaatggagagacagatgccagc
gcagtggagacgtgggagcagaaaggtgagccggatgaggaggaaccaggaggtggatcc
ccagcagacacaggattttgtggggatgaggcacaggatgaaatgatggaggaggatgag
gagatgccgactcccaagctgcctcctcctccaccggatgcccccaagaaagaacacgtg
aatgttgtgttcattggacatgtggatgcaggcaaatctacaattggtgggcaaattatg
tatctaactggtatggtggacaaacgaacgctggagaaatatgaacgggaggcgaaagag
aagaatagagagacttggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcctactttgaaactgagaaaaagcactttact
attctagacgccccaggccataaaagctttgtacccaacatgattggaggggcatcccaa
gctgacttggcagtgctggtcatctctgccagaaagggtgagtttgagaccggttttgaa
aaaggaggccagaccagggagcatgccatgctggccaaaacagctggagtcaaacatctg
gtagtcctcatcaacaaaatggacgatcccactgtgaactggagtttggatagatatgag
gaatgtaaagagaagttagtgccatttctgaagaaggtgggctttaatccaaagaaagac
attcacttcatgccctgctctggactgactggagccaacctgaaagaatcttctgagctg
tgcccttggtacacgggattaccgttcattccacatctggacagtctgccaaactttaac
agatcaagtgatggccccatccgattgcctattgtggataaatacaaggacatgggcact
gtggtgcttggaaaactggagtctggaagtatcatgaaagcacaacaactaattatgatg
ccaaataggcacacggtggaagtgttgagccttctctctgatgacgtggagaccgaatac
gctggacctggtgaaaacctgaagctccgtctcaaaggcattgaggaggaagagattctc
ccaggctttatcctatgcaacgctgagaacctctgccactcaggacgcactttcgatgcc
cagattgttattattgaacacaaatccataatatgcccaggttacaatgcagtactacac
atccatacctgcatagaagaagtgcagataacagcattaatctgtctggtggacaagaag
acaggagaaaagagcaagactcgtccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagggccgcaggaactatctgcttagagactttcaaagacttccctcagatggga
cgtttcactttgagggatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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