Labeo rohita (rohu): 127174471
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Entry
127174471 CDS
T09007
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127174471 (mms19)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127174471 (mms19)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127174471 (mms19)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
127174471 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
SCD
HEAT_ECM29
HEAT_EF3_N
Sec7-like_HUS
IFRD
INTS7_N
PDS5
Motif
Other DBs
NCBI-GeneID:
127174471
NCBI-ProteinID:
XP_050980876
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All DBs
Position
12:30493121..30516920
Genome browser
AA seq
1018 aa
AA seq
DB search
MAADNSVLMALVVEFVSGQVDSKAAETATGVKSGQFTVLQLVETLGFSLTSSQPQTRGRG
VQLLSQVLQECYSSLSEREVEVLLAFYENRLKDHYVITPHVLQGLKALTKCSVLPPGSAV
SILRSIFQDVHVQSLMVAERSCVYNILISLMESREEELKGLGADFVFGFVQSVDGERDPR
NLLLAFQVAQNIIHRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEELVLSLRAV
LTGTCQFAEFLLPLIIEKLDSDVQSAKVDSLQTLAACGLTYSHKELAEFLPGLWSTIRRE
VFQTASERVETAGLSALSALVSCLSRSVLNSDSEDVLQVFLNLVLKDCQHHLCEPDLKLV
WPSAKLLQAAAGASYRASLIVSAAVIPALLEQYNNRTQCAQRRTLLEVLQGFVQPTALSR
PTDGEDSVLVAFQQSLCSVVFSALTESSAGLQVTATRVITALGQQPGLLTQTDVEKAVDH
LTRLILEEDDTQVSSAVVECLGSLARLHPKAFISRMIPRLKERILSDESNAAVRQRCVTA
LASVSSQPSVVQESAPVLLQVLASAHTGSCGFSVEEVIAVCVSLRRIAEQARDSEEIGRF
FHDIIIPRLLGLCLQAALQSRDSAQGHCSPLTDEAVLCAVVPVISTACAALQSESASRMA
AQAVSLFLDGDVSFLPENAFPSKIQLLQSQAESRGPSQLVCLLMACVCSLPCSVEIPEMD
RLLLQLEDLSCTCPHLFSYTFAAKCFAGLVNKRPAGEALDVVLQRVMKRIGVELENISSA
QRTQAFTLLLWVAKALLVRYHPLSTALTDKLFVLLSDPALGSQVADGFGVLMSDSPDVLN
RDCHADVRIMYRQRFFAENSTKLVQGFNSAEQEKKSCYLKALSHIVSNLPRQVQLTELPA
LLPLLLEALSCADQAVQLSTLSCLQPVLLEPPPALRNQLEALFSRILALTTSPAMKVRIA
SLQCVHALSRLPEHMILPFRARVLKALAVPLDDKKRLVRKEAVAARGEWFLLGSPGGR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggataacagtgtgctgatggctttagtggtagaattcgtgtctggacaggtt
gatagcaaggccgcagaaaccgctacaggtgtcaagagtggacagttcacagttctccag
ctggttgaaacattggggtttagtctgaccagttctcagcctcagactcgtggccgagga
gttcagctcctgtctcaggtcctgcaggaatgctacagcagcctatctgagagagaagtg
gaggttctgttagctttctatgaaaacagactgaaggatcattatgtgatcacaccacat
gttcttcaggggctcaaggctttgacaaaatgctcagttctgcctccaggttcagctgtg
tccattttgagatccatcttccaggatgttcatgttcagtccttgatggtggcggagcga
tcatgtgtttacaacatccttatcagtctaatggagtccagagaggaagagctgaagggt
ttgggtgcagacttcgtatttggatttgtgcagtcagtagatggagaacgcgatccacgc
aacctcctgctggcgttccaggtggcccagaacatcattcacaggggttatgatctcggt
aaatttgtagaggagctgtttgaagtgacgtcctgttatttccccatagactttagtcct
ccacccaatgatcctcatgggatcacacaggaagagcttgttctttctctacgggctgtt
cttactgggacgtgtcagtttgctgagtttctgctgccattgatcattgagaagctggac
tcagatgttcagagtgccaaagtggactcgctgcagacactggccgcctgcggtttgaca
tatagccataaagagctggcagaattccttccaggcctttggagcacaatccggagggag
gtgttccagacggccagtgagagggtggaaacagcaggtctgtcagctctcagcgcgctg
gtgtcctgtctttctcgttctgtgctcaattcagactcagaggatgtgctgcaggttttt
ctaaaccttgtcctcaaagactgtcagcaccatctctgcgagccagacctcaagctggtg
tggcccagcgccaaactcctgcaggccgccgccggagcctcgtatagagccagtctgatt
gtgtcagctgccgtcatacctgccctcctggagcagtacaataaccggacacagtgtgct
caacggcgcaccctgctggaggttctgcagggttttgtgcagcccaccgcacttagccgg
cctacagacggagaggacagtgtattggttgcgtttcagcagtctttgtgtagcgtagtt
ttctctgcactgacggaatctagcgccggtctacaggtgacagccacacgtgtgatcact
gcactgggacagcagcccggtttgttgactcagacagatgtagagaaagctgttgatcat
ttaaccagactcattctggaggaagacgatactcaagtgagttcggctgtggtggagtgt
ttaggttctctggctcgtctgcatcccaaagccttcatctccaggatgattcctcgactg
aaggaacggatcctgtcagatgagtctaacgcagctgtacgtcagcggtgtgtgacggcg
ttagcgtccgtgtcgtctcaacccagcgtggtgcaggaaagcgctcccgttcttctacag
gtgctcgcttcagcccacacaggtagctgtggtttctctgtggaggaagtgatcgccgta
tgcgtcagtttgcggaggatagcggagcaagcgcgagactctgaggagattggacgattc
ttccatgacattatcattccacgacttctaggactgtgcctacaggcggcgctgcagagt
agagactcggctcagggtcactgtagtccactcacagatgaggccgttctgtgtgctgta
gttcctgtcatcagcacagcctgcgctgccttacagtcagagtcagcgtcccgcatggcc
gcccaggctgtttctctattcctggatggagacgtgtcctttctgccggagaatgccttc
ccttccaaaatccagttgctccagagccaagcagagtctcggggtccgtctcagctggtg
tgtctgctgatggcctgcgtctgctctcttccatgcagcgtggagattccagagatggac
cggctgctgctgcagttggaggatctgagctgcacgtgtcctcatctgttctcctacacg
tttgctgccaaatgcttcgctggtttggtcaacaagaggccggcaggtgaagctctagac
gtcgtgctgcagagggtgatgaagaggatcggcgtggagctggagaacatttcgtccgct
cagagaacacaagcgttcacgctgctgctctgggtggccaaagccctgctggtgcgctat
catccgctatcaacagccctgaccgacaagctcttcgttctgttgagtgacccggcgtta
ggatctcaggtggccgatggtttcggcgtcctcatgagcgactctccggatgtgctgaat
cgcgattgccacgcagacgtgcgcatcatgtaccgccaacgctttttcgctgaaaactcc
actaaactagttcaaggtttcaactcggcagagcaggagaagaagtcttgttatttgaag
gcgctgtcccacattgtcagtaacctccccagacaggtccagctcacggagcttcctgca
ctgctgccgctgttgttggaggcgctgtcgtgtgcggatcaggcggtgcagctctccact
ctgtcctgtctgcagccagtgttgctggagccgccgccggccctcaggaaccagctggag
gcgctgttctcccgcatactggccctcaccaccagcccggctatgaaagtgagaattgcg
tcgctccagtgtgttcatgcgctctcacgtctgcctgaacatatgatcctgccgttccgt
gccagagtcttgaaggctctcgctgttcctctggatgacaaaaagaggttggtgaggaag
gaggcggtggcggctcgaggagaatggtttttgttaggaagccccggtggaagatga
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