Labeo rohita (rohu): 127174482
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Entry
127174482 CDS
T09007
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127174482 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174482 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lroh02044
]
127174482 (sec31b)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127174482 (sec31b)
Secretion system [BR:
lroh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
127174482 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
TPR_Sec16
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
MukF_M
Prp18
Beta-prop_DCAF4
DprA_N
VSG_B
Motif
Other DBs
NCBI-GeneID:
127174482
NCBI-ProteinID:
XP_050980892
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All DBs
Position
12:878782..906648
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AA seq
1199 aa
AA seq
DB search
MRVKEILRTATQAWSPAKKHPTYLALGTAAQQLDASFNTSSALEIFEMDFADTSMDMKLK
GTLPTSNRFHSLIWVEFEMNVKGSGRLIGGSENGTVTVFNPDSILTAGEDAVIGQSNKHT
GPVRALDYNRFQSNLIASGANDSEIYIWDLNNFSNPMTPGAKSQPAEDVSVVAWNSQVQH
ILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVIQ
MWDLRFATSPLKVLENHTRGILSISWSQADPELLLSSGKDNRIMCWNPNTGEVIYELPTA
NQWCFDVQWCPRNPALLSAASFDGRISVYSVMGGCLQQHQHSTVDQISASFDTNDPFGTG
QTLPPLQVPQPTVETTIIPPLKKPPKWVRRPVGASFAFGGKLVTFENPKVAPQQQTAQPI
QRQVHVSQVTTETEFLQRSAELQAALQAGSFTNYCHSKVMSAPSDAEQDIWRFLMVNFED
EARLKFLRLLGFSKDELQRKISACLGRKLHPNGLDVNDLAEKMQSLSDQRADESGGAADG
LSGRESPADFFSQIPKKEKNKEPFQIPVSSDTDGLISQALLVGNFEGAVDLCLNDGRFAE
AILLSISGGEELLKKTQQRYLNRQTNSISMLISSVVTQNWRDIVQSCELDNWKEALAALL
TYADPEEFARLCDTLGSRLQAEGTEKRCLQACLCFICSGNIERLVECWTSQRDCSSPLAL
EDLVEKVMILRKSIERLRNGEVCVQSSALTERLIQYSSILASQGSLSSALNYLPDTSDQA
GVRMLRERLSHAKGDILQRPQPSAPAGGAKAPASTHTPAAHTQGPCASTAHPQMPQPVQQ
PMPRLFTPQPRPESAAPLPPPVSGASRPGLRPAYPQHPATASGFPPSQPFAQSGPLGGPV
GFMSGPSMPSSSLAGPSVPPCSPPGPMMPGGVPMMPAPPTPGFLSPTSLPGGPLPLFPGA
PHAQVPPPGGAYPPLGAGYPQGGPGAPAAMSFSGTNVPPPPTGYFPWLMCLTEEEVQDGW
NDPPAVRAGQRKKKLPENYTPPAPITAPVMGFPAEAPVPQDRVQVPPGAPQEPSVQSLQQ
LPAERVEQKEIPAEHMILKTTFGSLVQRCQLAAADPQTKRKLDDASKRLESLYDKLRDQA
LSPSILGGLHEISRCVGARNYQQGLEVHTQVVTSSNFSEISAFMPVLKVLMTIANKLAV
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggagatactccggacggccacacaggcatggagtcctgcaaaaaagcat
cccacctacctggccttaggcactgctgcacagcagctggacgcgtccttcaacaccagc
tctgctctggagatctttgagatggattttgcggatacatccatggacatgaagctcaaa
ggaactctgcctacatccaacaggtttcacagtctgatttgggtggagtttgaaatgaac
gtgaagggatcggggcgtctcatcggaggcagtgagaacggcaccgtgaccgttttcaac
ccagactccattctcaccgcgggagaggacgccgtgatcggacagtccaacaaacacacg
ggacccgtgcgtgcgctcgactacaaccgcttccagagtaatctcatcgcgtcaggagcc
aatgattccgaaatatacatctgggacttgaacaacttcagcaatcccatgacgccgggt
gcaaagtcacagccggcggaggacgtgagcgtggtggcgtggaacagtcaggtgcagcac
atactggcatccgcaaaccccagcgggaaagccgtcgtctgggatctgaggaagaacgag
cccatcatcaaaatcagtgaccacagcaacagaatgcactgctctgggatgttgtggcat
ccagatgtggccactcagctggttctggcgtcagaggacgacagacttcctgtcatacag
atgtgggatctccggtttgcaacctcacctctcaaagtcctggagaatcacaccagaggg
attttgtccatctcatggagtcaagccgatccagagctgcttctgagcagcggcaaagac
aaccggatcatgtgctggaacccaaacaccggagaggtgatttacgagctgccgacagcc
aatcagtggtgtttcgatgtgcagtggtgtcctcgtaaccccgccctcctgtcagccgca
tcatttgatgggcggatcagcgtgtactctgtgatgggaggatgtcttcagcaacatcag
cacagcacagtggaccagatctcagcttcgtttgacaccaacgacccgtttggaaccggt
cagactcttcctcctctgcaggttcctcaacccacagtcgaaaccaccatcatccctcct
ctgaaaaagccgcccaagtgggtacggaggcccgtaggcgcgtctttcgctttcggaggg
aagctggtgacgtttgagaaccctaaagtggctcctcagcagcagacggcgcagccgatc
cagcgacaggtgcacgtgagtcaggtgaccacagagacggagttcctccagcgctcggct
gagctgcaggccgctctgcaggccggatccttcaccaactactgccacagcaaggtcatg
agcgccccctctgacgccgagcaggacatatggaggttcctcatggttaattttgaagat
gaggcgcgtttgaagtttttgcgactgctgggtttcagtaaagacgagctgcagagaaag
atctcagcgtgtttggggaggaagcttcatccgaacggtttagatgtgaatgatctggct
gagaagatgcagtcgctttctgatcagagagcagacgagtcgggcggcgctgcggacggt
ttgtccggccgtgagtctcctgctgatttctttagtcaaataccaaagaaagagaaaaac
aaagagcccttccagatcccagtttcctcagatacggacggtttgatcagtcaggctctg
ttggtggggaacttcgagggcgcggtggatctgtgcctgaacgacggccgattcgccgag
gccatcctcctgtcaatcagcggaggggaggagctactgaagaagacccagcaacgatac
ctcaaccgacagaccaacagcatctccatgctgatctcatcagtggtgacccagaactgg
cgtgatatcgtccagagctgtgagctggataactggaaggaggcgctggcggccctgctg
acctacgctgacccggaggagttcgctcgtctctgcgatactctgggctctcgtctgcag
gctgaaggcacagagaagcgctgtctgcaggcctgtctgtgcttcatctgctcggggaac
atcgagcgtctggtggagtgctggacgtcccagagagactgctcgtctccgctcgcgctg
gaggatctggtggagaaggtgatgatcttgcgaaagtccatcgagcgtctgcgtaacggc
gaggtttgcgttcagagctcagcgctgaccgagaggctcatccagtactccagcatactg
gcgtcacagggcagcttgagttcagcgctcaactacctgcccgacacctccgaccaggct
ggtgttcggatgttgagagagcgactgtcacatgccaagggtgacatcctgcagagaccg
cagccgtctgcgccagcaggaggcgctaaagcaccggcaagcacacacactcccgcagca
cacacacaggggccgtgcgcgtccacggctcatcctcagatgccccagcccgtgcagcag
ccgatgccccgtctcttcactcctcaaccgcggccggagtctgctgctcctcttcctcct
cctgtttccggagcatcgcgtccaggcctgagacccgcctacccacaacaccccgccaca
gcttccggttttcctccatctcagccgtttgctcagtccggtccccttggaggtccggtg
ggtttcatgtctggcccatcgatgccctcctccagcctggcgggtccctcagtgccaccc
tgctctccaccgggtcccatgatgcctggcggcgtccccatgatgcctgctcctcccacc
ccgggattcttgtctcccacgtctctgccgggcggcccgttgcccttgtttccaggcgct
cctcacgcacaagtgcctcctcccggcggggcgtatcctcctctcggagccgggtatcct
cagggcggccctggagcgccagcggcaatgagtttcagtggcaccaatgtcccgcctcca
ccgacaggatatttcccatggctgatgtgcctcacagaagaggaagttcaggacgggtgg
aacgaccctccggctgtacgtgcaggacaacgcaaaaaaaagctgccagagaactacact
ccccctgctccgatcacggcgccagtgatgggtttcccggcggaggctcccgttcctcag
gatcgggtccaggtgccgcccggcgcccctcaggagcccagcgtacagtccttacagcag
cttcctgccgagcgcgtggagcagaaggaaatcccagccgaacacatgatcctcaagacc
accttcggcagcctggtgcagcgctgtcagctggccgccgcggacccgcaaacgaagcgc
aaactggacgatgcctccaaacgtctggagagtctgtacgacaaactgcgagaccaagcg
ctctctcccagcatcctcggcggcctccacgagatcagccgctgcgtgggagcccgtaac
tatcagcagggtctggaggttcacacgcaggtggtgaccagcagcaacttcagcgagatc
tctgccttcatgcccgtcctcaaagtgctcatgaccatcgccaacaaactggccgtgtga
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