KEGG   Labeo rohita (rohu): 127174482
Entry
127174482         CDS       T09007                                 
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A
  KO
K14005  protein transport protein SEC31
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127174482 (sec31b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127174482 (sec31b)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lroh02044]
    127174482 (sec31b)
Membrane trafficking [BR:lroh04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127174482 (sec31b)
Secretion system [BR:lroh02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   127174482 (sec31b)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_EIPR1 TPR_Sec16 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 MukF_M Prp18 Beta-prop_DCAF4 DprA_N VSG_B
Other DBs
NCBI-GeneID: 127174482
NCBI-ProteinID: XP_050980892
LinkDB
Position
12:878782..906648
AA seq 1199 aa
MRVKEILRTATQAWSPAKKHPTYLALGTAAQQLDASFNTSSALEIFEMDFADTSMDMKLK
GTLPTSNRFHSLIWVEFEMNVKGSGRLIGGSENGTVTVFNPDSILTAGEDAVIGQSNKHT
GPVRALDYNRFQSNLIASGANDSEIYIWDLNNFSNPMTPGAKSQPAEDVSVVAWNSQVQH
ILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVIQ
MWDLRFATSPLKVLENHTRGILSISWSQADPELLLSSGKDNRIMCWNPNTGEVIYELPTA
NQWCFDVQWCPRNPALLSAASFDGRISVYSVMGGCLQQHQHSTVDQISASFDTNDPFGTG
QTLPPLQVPQPTVETTIIPPLKKPPKWVRRPVGASFAFGGKLVTFENPKVAPQQQTAQPI
QRQVHVSQVTTETEFLQRSAELQAALQAGSFTNYCHSKVMSAPSDAEQDIWRFLMVNFED
EARLKFLRLLGFSKDELQRKISACLGRKLHPNGLDVNDLAEKMQSLSDQRADESGGAADG
LSGRESPADFFSQIPKKEKNKEPFQIPVSSDTDGLISQALLVGNFEGAVDLCLNDGRFAE
AILLSISGGEELLKKTQQRYLNRQTNSISMLISSVVTQNWRDIVQSCELDNWKEALAALL
TYADPEEFARLCDTLGSRLQAEGTEKRCLQACLCFICSGNIERLVECWTSQRDCSSPLAL
EDLVEKVMILRKSIERLRNGEVCVQSSALTERLIQYSSILASQGSLSSALNYLPDTSDQA
GVRMLRERLSHAKGDILQRPQPSAPAGGAKAPASTHTPAAHTQGPCASTAHPQMPQPVQQ
PMPRLFTPQPRPESAAPLPPPVSGASRPGLRPAYPQHPATASGFPPSQPFAQSGPLGGPV
GFMSGPSMPSSSLAGPSVPPCSPPGPMMPGGVPMMPAPPTPGFLSPTSLPGGPLPLFPGA
PHAQVPPPGGAYPPLGAGYPQGGPGAPAAMSFSGTNVPPPPTGYFPWLMCLTEEEVQDGW
NDPPAVRAGQRKKKLPENYTPPAPITAPVMGFPAEAPVPQDRVQVPPGAPQEPSVQSLQQ
LPAERVEQKEIPAEHMILKTTFGSLVQRCQLAAADPQTKRKLDDASKRLESLYDKLRDQA
LSPSILGGLHEISRCVGARNYQQGLEVHTQVVTSSNFSEISAFMPVLKVLMTIANKLAV
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgagggtgaaggagatactccggacggccacacaggcatggagtcctgcaaaaaagcat
cccacctacctggccttaggcactgctgcacagcagctggacgcgtccttcaacaccagc
tctgctctggagatctttgagatggattttgcggatacatccatggacatgaagctcaaa
ggaactctgcctacatccaacaggtttcacagtctgatttgggtggagtttgaaatgaac
gtgaagggatcggggcgtctcatcggaggcagtgagaacggcaccgtgaccgttttcaac
ccagactccattctcaccgcgggagaggacgccgtgatcggacagtccaacaaacacacg
ggacccgtgcgtgcgctcgactacaaccgcttccagagtaatctcatcgcgtcaggagcc
aatgattccgaaatatacatctgggacttgaacaacttcagcaatcccatgacgccgggt
gcaaagtcacagccggcggaggacgtgagcgtggtggcgtggaacagtcaggtgcagcac
atactggcatccgcaaaccccagcgggaaagccgtcgtctgggatctgaggaagaacgag
cccatcatcaaaatcagtgaccacagcaacagaatgcactgctctgggatgttgtggcat
ccagatgtggccactcagctggttctggcgtcagaggacgacagacttcctgtcatacag
atgtgggatctccggtttgcaacctcacctctcaaagtcctggagaatcacaccagaggg
attttgtccatctcatggagtcaagccgatccagagctgcttctgagcagcggcaaagac
aaccggatcatgtgctggaacccaaacaccggagaggtgatttacgagctgccgacagcc
aatcagtggtgtttcgatgtgcagtggtgtcctcgtaaccccgccctcctgtcagccgca
tcatttgatgggcggatcagcgtgtactctgtgatgggaggatgtcttcagcaacatcag
cacagcacagtggaccagatctcagcttcgtttgacaccaacgacccgtttggaaccggt
cagactcttcctcctctgcaggttcctcaacccacagtcgaaaccaccatcatccctcct
ctgaaaaagccgcccaagtgggtacggaggcccgtaggcgcgtctttcgctttcggaggg
aagctggtgacgtttgagaaccctaaagtggctcctcagcagcagacggcgcagccgatc
cagcgacaggtgcacgtgagtcaggtgaccacagagacggagttcctccagcgctcggct
gagctgcaggccgctctgcaggccggatccttcaccaactactgccacagcaaggtcatg
agcgccccctctgacgccgagcaggacatatggaggttcctcatggttaattttgaagat
gaggcgcgtttgaagtttttgcgactgctgggtttcagtaaagacgagctgcagagaaag
atctcagcgtgtttggggaggaagcttcatccgaacggtttagatgtgaatgatctggct
gagaagatgcagtcgctttctgatcagagagcagacgagtcgggcggcgctgcggacggt
ttgtccggccgtgagtctcctgctgatttctttagtcaaataccaaagaaagagaaaaac
aaagagcccttccagatcccagtttcctcagatacggacggtttgatcagtcaggctctg
ttggtggggaacttcgagggcgcggtggatctgtgcctgaacgacggccgattcgccgag
gccatcctcctgtcaatcagcggaggggaggagctactgaagaagacccagcaacgatac
ctcaaccgacagaccaacagcatctccatgctgatctcatcagtggtgacccagaactgg
cgtgatatcgtccagagctgtgagctggataactggaaggaggcgctggcggccctgctg
acctacgctgacccggaggagttcgctcgtctctgcgatactctgggctctcgtctgcag
gctgaaggcacagagaagcgctgtctgcaggcctgtctgtgcttcatctgctcggggaac
atcgagcgtctggtggagtgctggacgtcccagagagactgctcgtctccgctcgcgctg
gaggatctggtggagaaggtgatgatcttgcgaaagtccatcgagcgtctgcgtaacggc
gaggtttgcgttcagagctcagcgctgaccgagaggctcatccagtactccagcatactg
gcgtcacagggcagcttgagttcagcgctcaactacctgcccgacacctccgaccaggct
ggtgttcggatgttgagagagcgactgtcacatgccaagggtgacatcctgcagagaccg
cagccgtctgcgccagcaggaggcgctaaagcaccggcaagcacacacactcccgcagca
cacacacaggggccgtgcgcgtccacggctcatcctcagatgccccagcccgtgcagcag
ccgatgccccgtctcttcactcctcaaccgcggccggagtctgctgctcctcttcctcct
cctgtttccggagcatcgcgtccaggcctgagacccgcctacccacaacaccccgccaca
gcttccggttttcctccatctcagccgtttgctcagtccggtccccttggaggtccggtg
ggtttcatgtctggcccatcgatgccctcctccagcctggcgggtccctcagtgccaccc
tgctctccaccgggtcccatgatgcctggcggcgtccccatgatgcctgctcctcccacc
ccgggattcttgtctcccacgtctctgccgggcggcccgttgcccttgtttccaggcgct
cctcacgcacaagtgcctcctcccggcggggcgtatcctcctctcggagccgggtatcct
cagggcggccctggagcgccagcggcaatgagtttcagtggcaccaatgtcccgcctcca
ccgacaggatatttcccatggctgatgtgcctcacagaagaggaagttcaggacgggtgg
aacgaccctccggctgtacgtgcaggacaacgcaaaaaaaagctgccagagaactacact
ccccctgctccgatcacggcgccagtgatgggtttcccggcggaggctcccgttcctcag
gatcgggtccaggtgccgcccggcgcccctcaggagcccagcgtacagtccttacagcag
cttcctgccgagcgcgtggagcagaaggaaatcccagccgaacacatgatcctcaagacc
accttcggcagcctggtgcagcgctgtcagctggccgccgcggacccgcaaacgaagcgc
aaactggacgatgcctccaaacgtctggagagtctgtacgacaaactgcgagaccaagcg
ctctctcccagcatcctcggcggcctccacgagatcagccgctgcgtgggagcccgtaac
tatcagcagggtctggaggttcacacgcaggtggtgaccagcagcaacttcagcgagatc
tctgccttcatgcccgtcctcaaagtgctcatgaccatcgccaacaaactggccgtgtga

DBGET integrated database retrieval system