Labeo rohita (rohu): 127174490
Help
Entry
127174490 CDS
T09007
Symbol
ccz1
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127174490 (ccz1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174490 (ccz1)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Others
Others
127174490 (ccz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
TSLP
Motif
Other DBs
NCBI-GeneID:
127174490
NCBI-ProteinID:
XP_050980903
LinkDB
All DBs
Position
12:19210776..19223585
Genome browser
AA seq
480 aa
AA seq
DB search
MLMISPRMASGMQEKQYTPSLLSFFIYNPKFGPREGEEEKKILFYHPIEIEKNEKIRNVG
LCEAIVQFTRTFCPTKPAKSLHTQKNRQFFHEPEENYWMVMVVRNPMVEKPNKDGKPPTV
EYQEEEIIDSVYGSVLQQCYSMYKLFNGTFSRAFEAGGVELLTQKLEKFFYRYLQTLHLQ
SCDLLDVFGGISFFPLDKMTYLKIQSFVNRVEESLSLVKYTAFLYNDQLIWSGLEQDDMR
ILYKYLTTSLFPRHTEPELAGRDSPLRPEVAGNLLHYGRFLTGPANLKDPDAKFRFPRIF
VNTEDSYEELHLIVYKAMSAAVCFMVNVGVDLNREFCEQLDSLVGPQLTLLASDICEQYN
INRRISGPEKEPQFKFIYFNHMNLAEKSTIHMRKTASVSLTSVHPDLMKILGDINCDFAR
VDEDEEIIVKAMTDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKRLCATQFNNIFFLD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgatcagcccaagaatggcatctggaatgcaagagaaacaatacacaccatct
ttgctcagttttttcatctataaccctaagtttggaccacgtgagggcgaggaggaaaag
aaaatcctgttttaccacccgattgaaatagagaagaacgaaaagattcgcaatgttgga
ctctgtgaggccatcgttcagttcaccagaaccttctgtccaacaaaaccagccaaatca
ctccacactcagaagaaccgacagtttttccatgagccggaggagaattactggatggtc
atggttgtacggaatccaatggttgaaaaacccaacaaagacggaaaaccacccactgta
gaataccaagaggaagagattatagattcagtttatgggtctgtgttacaacagtgctac
agcatgtataagctcttcaacggcacattcagcagggcatttgaggctggtggagtggaa
ctgctcacccaaaagcttgaaaagttcttttacaggtacctgcagacacttcatcttcag
tcatgtgacctgctggatgtgttcgggggaatcagcttttttcctcttgacaagatgacc
tacctgaagatccagtcttttgtcaatagagtagaagagagcctgagtcttgtcaaatac
acggcctttctctacaacgaccagctgatctggagtggtctagaacaggatgacatgcga
attctctacaaatacttgacgacctcactgttcccacgacacactgaacccgagcttgca
ggaagagactctccgctcaggccagaggtggctgggaatctgttgcactacgggagattt
ttaacaggaccagcaaatcttaaagatccagatgcaaaattcagatttcccaggatattt
gtgaacacagaggacagttatgaagagctacatttgattgtttacaaggcaatgagtgca
gctgtatgcttcatggtaaatgtgggagtggatttgaatcgtgagttttgtgaacaacta
gacagcctggttggtccccaactcaccctgctggcctctgacatatgtgagcagtacaac
attaaccgaagaatatcggggccagagaaagagcctcagtttaagttcatctacttcaac
cacatgaacttggctgagaaaagcaccatccacatgcgcaagacggccagcgtgtccctc
acctctgtccatccggacctcatgaaaatccttggagacatcaactgcgattttgcacgg
gttgatgaggacgaggaaatcattgttaaagcgatgaccgattactgggttgttggaaag
aagtctgatcagagggagctgtacgtcattttgaaccagaagaatgccaaccttattgaa
gtgaatgaggaagttaaaaggctgtgtgcaacacaattcaataatatttttttcttggac
tga
DBGET
integrated database retrieval system
