KEGG   Labeo rohita (rohu): 127174499
Entry
127174499         CDS       T09007                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127174499 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lroh03019]
    127174499 (exosc4)
Messenger RNA biogenesis [BR:lroh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     127174499 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     127174499 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 127174499
NCBI-ProteinID: XP_050980920
LinkDB
Position
2:3118161..3121919
AA seq 245 aa
MAGLELLSDQGYRLDGRKASELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHETRG
SRSKSLHDRAVINCQYSMATFSTAERKRRPHGDRKSSEMSLHLKQTFEAAVLTELYPRSQ
IDIYVKILQADGGNYSACVNAATLALVDAGIPMRDYVCACTAGFVEDTPLADLCHAEESG
GGTSLALALLPRSGNIALLQMDARLHQDHLDPLIEAAMTACKGLSKVLDGVVRQHLEEVS
VLTRD
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcggggcttgagttgctgtcagatcagggataccgactagatggacggaaagcgtcc
gagctgcgtaaagttcaggcccgtatgagtgtgttcgcgcaggcggacgggtccgcgtat
ctggagcagggaaacactaaagcgctggcggtggtgtatggaccgcatgagacacgaggc
tcccgcagtaaatcgctgcatgatcgtgcggtcattaactgtcagtacagcatggccacg
ttcagcacggctgagaggaagagacgtccacacggagaccgcaagtccagcgagatgagc
cttcatctcaaacagacctttgaagctgcggttctcactgagctctacccacgatcacaa
atcgacatctacgttaagattctgcaggcagacggtggaaactacagtgcttgtgtcaat
gctgctactttggctctggtggacgctggtattcccatgcgggactatgtgtgcgcctgc
acagctggctttgtggaggatacgccgctggcggatctgtgtcacgcagaggagagcgga
ggaggaacgtcgctggcgttggccctgctgcctcgtagcggaaacatcgccctgctgcag
atggacgcccggctccaccaggaccacttggaccctttaatagaggcagccatgacagcg
tgtaaaggtctcagtaaagtcctggacggcgttgtgcgtcagcatctagaagaggtttca
gttctgaccagagattga

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