Labeo rohita (rohu): 127174508
Help
Entry
127174508 CDS
T09007
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174508 (vps35l)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Others
Retriever complex
127174508 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
127174508
NCBI-ProteinID:
XP_050980924
LinkDB
All DBs
Position
12:complement(22884040..22901568)
Genome browser
AA seq
963 aa
AA seq
DB search
MASVQWHSRFRKYETELQVCRLETSAVEFSDYHPLKAITVTDSKSRRSGRKGSTSSSSSS
SSSVALDPLSSMLDGTDPLSLFAAASETPTIPHSISAGELGRKRKEKDEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWSTDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCADPHPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGESVQNQLVLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMERCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPEN
ERLSILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLQSVIKKILTYFHDFSVLFSMEKFLPFMDMFQKDSVRVEVCKSIMEVFIKHQQEA
TRDPVILNALLHICKTMHDSVNALTLDDEKRALSLLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFS
RLNLYLLSGQVALANLCLSQADAFLKAAVSLLPEVPRTISIEGKQRSSEPFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKIRVYVSALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKGLGRDEGVRRQGSLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGFCDTRTSVRTLEYIKHQAQQADMSHLSDMTARLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcagtggcactctcggttccgtaaatatgagactgagttgcaggtgtgt
cgtttggagacttcagcagtggagttcagtgactatcatccgcttaaagcaatcacggtg
actgattctaaatctcgccgtagtgggcggaaaggcagcacttcctcctcatcatcctcc
tctagttctgtggctctggatccactcagctcaatgttggatgggactgacccactgtct
ctctttgctgcggcatctgagacaccaactattccacacagcatctctgctggggagttg
gggcggaaacgtaaggagaaagacgaggaagtgggcttagactttgagccgtggtcatct
aaacgtggagagattctgtctagattcaccaccacagagaaactttctataaatctcttc
atgggctcagacaagagtaaagcatccagtcccagctcagcagtgtcagagaaggtgcgc
actcgtctggaggaactggatgacctagaggagggctcacagagggagctgttgaacctg
tcccagcaggactatgtcaaccgcattgaagagctcaaccagtctctgaaggaggcctgg
agtacagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacgtcagtaattcagttctaccccagcaagtttgttctcatcacagatatcttggac
accttcggtggtctggtgtatgacaggatctggtccatgtgtgctgaccctcatcctcta
ccagaatcgttctccgctgatgatgtgaatgacaccgccaaagagacgtgcctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgattatatgttgaagctgctctt
ttgaaatgcaaccgcttcttaacaaagtctgggattcaggagacgctgcagagactgaca
gcgatgatcagaggaataggagacccgctggtggccgtatatgcacgagcgtatttatgc
agggtggggatggaggtggcaccacatttgaaggacagtctcaataagaatttcttcgac
ctgctggcctcgttccgtcagattcatggtgaaagtgtgcagaatcagctagtgttgcag
cgggtggagattcccatctatctgaccctctattctcctgccatacactggatcctgcag
tgtgtagcatacagagcaccagaggttctgctaacagagatgatggagagatgcaagaag
ctgggcaataatgctctcctgctgaactctgtcatgtgggcattccgggcagaatttgtt
gcgacgcgagcaacagattttattggcatgatcaaagactgtgacgaagctggatttccc
aagcacctgttgtttgcatctctgggtcgcagtctgtcctgtgctgaccctccagagaat
gaaagactgtccatactcaacgaagcttggaaggtcatcactaaagtgcgcagtccaagg
gattacattaactgtgctgagatctgggtggagttcacctgccgtcacttcacaaaacgg
gaggtgaacacggttcttgctgacatcatcaaacatatgactccagacagagcttttgag
gatgcatatccacagctgcagtcagtgataaagaagatcctcacctacttccatgacttc
tcagtgctcttctcaatggagaagttcttgccctttatggacatgttccagaaagacagc
gtaagggtggaagtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaagca
acaagagatcctgtcattctcaatgcgctgttgcacatctgtaagaccatgcatgactct
gtcaatgctctaactctggatgatgagaaaagagctctgtctctgctgatcaatggattt
attcgtatggtgtcattcgggagggactttgagcagcagttgagtttctgtgtggaagcc
agagcgactttctgtaatctagagcccgtcatcattcacctgatacatacagtgaatcag
ttagcaatggagaccagacgcgtaatgaaaggcaatcactcaaggaaaacggctgctttc
gtcagggcgtgcgctgcctacagtttcatcaccattccgtccctcaccagtatcttcagc
cgtctcaacctctatctgctctctggacaggtagcgctggccaacctgtgtctgtcccag
gcggacgcatttctaaaggcagcagtcagtcttttaccagaagttccgcgaaccatcagt
attgagggtaaacagcgatcatctgagcccttccttcttgacttcattaacaacttcctc
tccacactgctcgttgtaccggatcatccagaacagggtgtgttgtatctggtgcgaggg
ctgttgaatatggtgcaggactacacctgggaagacaacagtgacgctaagatccgcgtc
tatgtcagtgctttaccattacttgcagcaatgagccaagaaagctatctctacaccatt
cctaaagtggattccaatgaaaccctctatggaggagatcccaagttcatcgcagagatc
aataagttgtgtgagactctgatcggccaggttctggatcatttaaaggggctgggccga
gatgagggagtgcgcaggcagggcagtctggctttctctctgtttggctgtctgttggct
catggtgatctacgcaacaacaaactaaatcagctggctgtcaacctgtggaatctcagc
cacaaacacggtttctgtgacacgcgcacatcggttcggactctagagtacatcaaacat
caggcgcagcaggcagatatgagccatctctctgacatgacagcacgcctgtctcttcag
tccagagcctga
DBGET
integrated database retrieval system
