Labeo rohita (rohu): 127174545
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Entry
127174545 CDS
T09007
Symbol
stx4
Name
(RefSeq) syntaxin-4
KO
K13502
syntaxin 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127174545 (stx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174545 (stx4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127174545 (stx4)
Membrane trafficking [BR:
lroh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
127174545 (stx4)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127174545 (stx4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
PilO
Sec10_N
DUF16
POTRA
FlxA
Lzipper-MIP1
L27_2
DotU
ABC_toxin_N
COG5_N
COX2-transmemb
Med9
T2SSF
Spc29
Motif
Other DBs
NCBI-GeneID:
127174545
NCBI-ProteinID:
XP_050980999
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All DBs
Position
12:complement(17548729..17558583)
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AA seq
297 aa
AA seq
DB search
MRDRTKELGNTADASEEDEETVALMIKPGSGSSANEEKENEAFFKKVQEIREGLETIKRK
VSELENKQKTVLGVALPEDSMKKELQSLREDIKGMASQIQKKLKSIEPKKTEGEDKYIPV
NVRMRRTQHGVLSREFLEVMGHCNTIQAQYRDRNVERIQRQLKITGNNVTDEELESMLES
GQTDVFTQNILNDAKATRQALNEIESRHDEIIKLEKSIKELHDMFQYLAMEVEAQGEMVD
RIEESIKNSHNYVEKAVAETASAVETSKKVRKKKLWIALCLAILLVVIAIILAISFS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccggaccaaagaactgggcaatactgctgatgcctcagaagaagatgaagaa
accgtagctctcatgatcaagcccggatctgggagttcagcaaatgaagagaaagaaaat
gaagcttttttcaaaaaggttcaggagattcgagagggactcgaaacaattaaaaggaag
gtgtctgaattggagaacaaacagaaaacagtgttaggagttgcacttccagaagacagt
atgaaaaaggaactgcagtctctcagagaagacatcaaaggcatggccagccagattcaa
aagaagttaaaaagcatcgaacctaagaaaactgaaggtgaagacaaatatattccagta
aacgttagaatgcggagaacccagcatggtgttttgtcccgggaatttctggaagtgatg
ggtcactgtaatacaattcaagcccaatacagagacagaaatgtggagaggatacaaaga
caactcaaaatcactggtaacaatgtgacagatgaggagctggaatcaatgcttgagagt
ggacaaacagatgttttcacgcaaaatattttgaatgatgctaaagctaccagacaggct
ctgaacgagatcgagtcacggcatgatgagatcatcaagctagagaaaagcattaaagag
ctacacgatatgtttcagtaccttgcgatggaggtggaagcacagggtgagatggtggac
cggattgaggagagcattaagaattcccataactatgtggaaaaggctgttgctgagaca
gcttctgctgtagaaacttcaaaaaaagtgcgcaagaaaaaattatggattgcattatgc
cttgctatattacttgtagtaatagccattatactggctatcagtttcagttga
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