Labeo rohita (rohu): 127174607
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Entry
127174607 CDS
T09007
Symbol
six2b
Name
(RefSeq) homeobox protein SIX2b
KO
K19472
homeobox protein SIX2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174607 (six2b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127174607 (six2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
127174607
NCBI-ProteinID:
XP_050981067
LinkDB
All DBs
Position
12:14481538..14483973
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AA seq
288 aa
AA seq
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MSMPPTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKVLESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRCVLKEWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENDGANPNGHNSLTSHVNENKSLCESSEDDKSPSATPDHTSMSPAILMPSSSG
LPPLHSFAPPPGPSASIIPVSDTQSHHHFSMHDGLLNTMTASLVELGS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgccaccaacttttggatttacccaagagcaggttgcctgcgtctgcgaggtc
cttcagcaaggtgggagtatcgaacgtctcggacgctttctgtggtccttacctgcttgt
gagcacctccacaaaaatgagagcgtattgaaagcgaaagccgtggtagctttccaccgg
ggcaacttcagggagctctacaaagtgttagagagccaccagttttctccgcacaaccac
cccaaactgcaacagctctggctgaaagctcactatgtcgaagcggagaaattgcgcggc
cgtcctctgggcgcagtgggaaaataccgagtgcgcagaaagttcccgttgcctcgcacc
atctgggatggagaggaaaccagctactgttttaaggagaagagccggtgcgtgcttaaa
gagtggtatactcacaacccgtacccttccccgagagagaagagagaactggccgaggcc
acgggcctcaccacgacgcaggtcagcaactggttcaagaacaggaggcaaagggaccgt
gcagcagaagcaaaggaaagggaaaacgatggtgcaaatccaaacggccacaactcactg
acctctcacgtgaacgaaaacaaatctctgtgtgaaagttctgaggacgacaaatctccc
tcggcgaccccggatcacacctccatgagcccagccatcctaatgccctccagctcaggt
ctgccacccctgcacagcttcgcgcctccgcccggccccagcgcctccatcatccccgtc
agcgacactcagagccaccaccacttctccatgcacgacggccttctcaacactatgacg
gccagcctggtggagcttggatcataa
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