Labeo rohita (rohu): 127174708
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Entry
127174708 CDS
T09007
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
KO
K15614
homeobox protein SIX1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174708 (six1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127174708 (six1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
127174708
NCBI-ProteinID:
XP_050981186
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Position
13:complement(22184694..22189155)
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AA seq
283 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNGVGGKQSQRSPLDGVKSLMSSSEDEFSPPQSPEHNPVLLLQGNMNNP
GAPAYPMPGLGAQHSVHSMQGHPHQIQDSLLGSLTSSLVDLGS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttgccctctttcggctttacgcaggagcaggtcgcatgcgtctgcgaggtg
ctgcagcagggtgggaatctggagaggctcggacgtttcctttggtccctgccagcctgt
gaccacctccacaagaacgaatccgtgctgaaagcgaaggccgtggtggccttccacagg
ggaaacttccgtgagctctacaagatcctggagagccatcagttctccgcgcacaaccac
ccgaagctgcagcagctgtggctgaaggcgcactacgtggaggcggaaaagttgcggggc
cgcccgctaggcgctgtgggcaaataccgtgtgcgcaggaaatttcctttgccccgtacg
atctgggacggtgaggagaccagttactgctttaaggagaagtctcggggcgtgctgcgt
gaatggtacacgcacaatccctatccatctccacgggagaagcgggagctcgcggaggca
acggggctgaccaccacacaggtcagcaactggtttaaaaacaggaggcagagagaccgg
gcagctgaggcaaaagagagagaaaacaccgagaacaacggcgttggcggtaagcagagc
cagcggtccccgctcgacggagtaaagtcgctcatgtccagctcggaggatgagttctct
ccgccgcagagccccgagcacaaccccgtgcttctactgcaggggaacatgaacaatccc
ggggctcccgcatacccaatgcccggcctcggtgcacagcattcggtgcacagcatgcaa
ggacatccgcatcagatccaggattcactattgggatctctaacatccagccttgtggat
ctaggatcttag
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